Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ARCN1P48444 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARCN1P48444 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARCN1P48444 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ARCN1P48444 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ARCN1P48444 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.28■□□□□ 0.36
ARCN1P48444 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ARCN1P48444 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
ARCN1P48444 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
ARCN1P48444 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.27■□□□□ 0.36
ARCN1P48444 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ARCN1P48444 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ARCN1P48444 AL020989.1-201ENST00000422979 469 ntBASIC17.27■□□□□ 0.36
ARCN1P48444 TPM4P1-201ENST00000436100 807 ntBASIC17.27■□□□□ 0.36
ARCN1P48444 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 ABCD1P5-201ENST00000445663 754 ntBASIC17.27■□□□□ 0.36
ARCN1P48444 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.27■□□□□ 0.36
ARCN1P48444 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.27■□□□□ 0.36
ARCN1P48444 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.27■□□□□ 0.36
ARCN1P48444 AC073592.4-201ENST00000623827 446 ntBASIC17.27■□□□□ 0.36
ARCN1P48444 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ARCN1P48444 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ARCN1P48444 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
ARCN1P48444 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.27■□□□□ 0.35
ARCN1P48444 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ARCN1P48444 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ARCN1P48444 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ARCN1P48444 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.27■□□□□ 0.35
ARCN1P48444 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ARCN1P48444 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.27■□□□□ 0.35
ARCN1P48444 FRMD8P1-201ENST00000440433 1524 ntBASIC17.26■□□□□ 0.35
ARCN1P48444 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ARCN1P48444 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ARCN1P48444 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ARCN1P48444 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
ARCN1P48444 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.26■□□□□ 0.35
ARCN1P48444 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.26■□□□□ 0.35
ARCN1P48444 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.26■□□□□ 0.35
ARCN1P48444 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.26■□□□□ 0.35
ARCN1P48444 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.26■□□□□ 0.35
ARCN1P48444 LINC01711-201ENST00000598340 967 ntBASIC17.26■□□□□ 0.35
ARCN1P48444 AL591684.3-201ENST00000605187 298 ntBASIC17.26■□□□□ 0.35
ARCN1P48444 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ARCN1P48444 SIGLEC16-201ENST00000599858 1437 ntBASIC17.26■□□□□ 0.35
ARCN1P48444 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ARCN1P48444 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ARCN1P48444 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms