Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 KRT8P7-201ENST00000533003 1432 ntBASIC15.52■□□□□ 0.08
SOX6P35712 HOXB1-202ENST00000577092 1414 ntBASIC15.52■□□□□ 0.08
SOX6P35712 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.52■□□□□ 0.08
SOX6P35712 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SOX6P35712 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SOX6P35712 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SOX6P35712 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 GCSHP5-201ENST00000443090 522 ntBASIC15.52■□□□□ 0.08
SOX6P35712 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.52■□□□□ 0.08
SOX6P35712 AC098590.1-201ENST00000468126 897 ntBASIC15.52■□□□□ 0.08
SOX6P35712 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.52■□□□□ 0.08
SOX6P35712 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SOX6P35712 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.52■□□□□ 0.08
SOX6P35712 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
SOX6P35712 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SOX6P35712 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SOX6P35712 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 UBE2SP1-201ENST00000450587 669 ntBASIC15.51■□□□□ 0.07
SOX6P35712 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SOX6P35712 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.51■□□□□ 0.07
SOX6P35712 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
SOX6P35712 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 LINC01311-201ENST00000565162 1445 ntBASIC15.51■□□□□ 0.07
SOX6P35712 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SOX6P35712 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SOX6P35712 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
SOX6P35712 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.5■□□□□ 0.07
SOX6P35712 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SOX6P35712 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SOX6P35712 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SOX6P35712 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SOX6P35712 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms