RNA–Protein interactions for RNA: ENST00000381812.5

SDCBP2-204, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDCBP2, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-204ENST00000381812 NISCHQ9Y2I1 1504 aa42.33■■■■■ 4.37
SDCBP2-204ENST00000381812 CCDC180Q9P1Z9 1646 aa37.34■■■■□ 3.57
SDCBP2-204ENST00000381812 ABCC9O60706 1549 aa36.3■■■■□ 3.4
SDCBP2-204ENST00000381812 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
SDCBP2-204ENST00000381812 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
SDCBP2-204ENST00000381812 NACADO15069 1562 aa35.08■■■■□ 3.21
SDCBP2-204ENST00000381812 RB1CC1Q8TDY2 1594 aa35.01■■■■□ 3.2
SDCBP2-204ENST00000381812 MYO15BQ96JP2 1530 aa35■■■■□ 3.19
SDCBP2-204ENST00000381812 DCAF1Q9Y4B6 1507 aa35■■■■□ 3.19
SDCBP2-204ENST00000381812 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
SDCBP2-204ENST00000381812 SCRIBQ14160 1630 aa34.18■■■■□ 3.06
SDCBP2-204ENST00000381812 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.05
SDCBP2-204ENST00000381812 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
SDCBP2-204ENST00000381812 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
SDCBP2-204ENST00000381812 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
SDCBP2-204ENST00000381812 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
SDCBP2-204ENST00000381812 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
SDCBP2-204ENST00000381812 CC2D2AQ9P2K1 1620 aa32.81■■■□□ 2.84
SDCBP2-204ENST00000381812 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
SDCBP2-204ENST00000381812 SMARCA4P51532 1647 aa32.72■■■□□ 2.83
SDCBP2-204ENST00000381812 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
SDCBP2-204ENST00000381812 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
SDCBP2-204ENST00000381812 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.79
SDCBP2-204ENST00000381812 NCAPD3P42695 1498 aa32.42■■■□□ 2.78
SDCBP2-204ENST00000381812 SMARCA2P51531 1590 aa32.42■■■□□ 2.78
SDCBP2-204ENST00000381812 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
SDCBP2-204ENST00000381812 WIZO95785 1651 aa32.3■■■□□ 2.76
SDCBP2-204ENST00000381812 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
SDCBP2-204ENST00000381812 HMGXB3Q12766 1538 aa32.22■■■□□ 2.75
SDCBP2-204ENST00000381812 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
SDCBP2-204ENST00000381812 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
SDCBP2-204ENST00000381812 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
SDCBP2-204ENST00000381812 NESP48681 1621 aa31.54■■■□□ 2.64
SDCBP2-204ENST00000381812 CADPSQ9ULU8 1353 aa31.52■■■□□ 2.64
SDCBP2-204ENST00000381812 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
SDCBP2-204ENST00000381812 CFTRP13569 1480 aa31.39■■■□□ 2.62
SDCBP2-204ENST00000381812 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
SDCBP2-204ENST00000381812 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
SDCBP2-204ENST00000381812 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
SDCBP2-204ENST00000381812 KIF21AQ7Z4S6 1674 aa31.09■■■□□ 2.57
SDCBP2-204ENST00000381812 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
SDCBP2-204ENST00000381812 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.56
SDCBP2-204ENST00000381812 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.54
SDCBP2-204ENST00000381812 THOC2Q8NI27 1593 aaKnown RBP30.87■■■□□ 2.53
SDCBP2-204ENST00000381812 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
SDCBP2-204ENST00000381812 WDR62O43379 1518 aa30.75■■■□□ 2.51
SDCBP2-204ENST00000381812 CUX2O14529 1486 aa30.71■■■□□ 2.51
SDCBP2-204ENST00000381812 ABCC8Q09428 1581 aa30.67■■■□□ 2.5
SDCBP2-204ENST00000381812 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
SDCBP2-204ENST00000381812 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
SDCBP2-204ENST00000381812 CUX1P39880 1505 aa30.59■■■□□ 2.49
SDCBP2-204ENST00000381812 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
SDCBP2-204ENST00000381812 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
SDCBP2-204ENST00000381812 SYNJ1O43426 1573 aa30.43■■■□□ 2.46
SDCBP2-204ENST00000381812 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
SDCBP2-204ENST00000381812 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
SDCBP2-204ENST00000381812 SOGA1O94964 1423 aa30.36■■■□□ 2.45
SDCBP2-204ENST00000381812 IFT140Q96RY7 1462 aa30.36■■■□□ 2.45
SDCBP2-204ENST00000381812 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
SDCBP2-204ENST00000381812 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
SDCBP2-204ENST00000381812 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
SDCBP2-204ENST00000381812 ZNF608Q9ULD9 1512 aaPredicted RBP30.24■■■□□ 2.43
SDCBP2-204ENST00000381812 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
SDCBP2-204ENST00000381812 TDRD9Q8NDG6 1382 aaKnown RBP30.18■■■□□ 2.42
SDCBP2-204ENST00000381812 AQRO60306 1485 aaKnown RBP eCLIP30.15■■■□□ 2.42
SDCBP2-204ENST00000381812 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.42
SDCBP2-204ENST00000381812 CHIC1Q5VXU3 224 aa30.11■■■□□ 2.41
SDCBP2-204ENST00000381812 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
SDCBP2-204ENST00000381812 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
SDCBP2-204ENST00000381812 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
SDCBP2-204ENST00000381812 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
SDCBP2-204ENST00000381812 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
SDCBP2-204ENST00000381812 KIF27Q86VH2 1401 aa29.89■■■□□ 2.37
SDCBP2-204ENST00000381812 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
SDCBP2-204ENST00000381812 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
SDCBP2-204ENST00000381812 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
SDCBP2-204ENST00000381812 IGF1RP08069 1367 aa29.79■■■□□ 2.36
SDCBP2-204ENST00000381812 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
SDCBP2-204ENST00000381812 ERICH3Q5RHP9 1530 aa29.76■■■□□ 2.35
SDCBP2-204ENST00000381812 FBLN2P98095 1184 aa29.75■■■□□ 2.35
SDCBP2-204ENST00000381812 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
SDCBP2-204ENST00000381812 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
SDCBP2-204ENST00000381812 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
SDCBP2-204ENST00000381812 OSCARQ8IYS5 282 aa29.64■■■□□ 2.34
SDCBP2-204ENST00000381812 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
SDCBP2-204ENST00000381812 CHD1O14646 1710 aa29.59■■■□□ 2.33
SDCBP2-204ENST00000381812 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
SDCBP2-204ENST00000381812 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
SDCBP2-204ENST00000381812 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
SDCBP2-204ENST00000381812 EEA1Q15075 1411 aa29.54■■■□□ 2.32
SDCBP2-204ENST00000381812 CUL7Q14999 1698 aa29.53■■■□□ 2.32
SDCBP2-204ENST00000381812 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
SDCBP2-204ENST00000381812 DNAJC5Q9H3Z4 198 aa29.43■■■□□ 2.3
SDCBP2-204ENST00000381812 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
SDCBP2-204ENST00000381812 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
SDCBP2-204ENST00000381812 NUP160Q12769 1436 aa29.38■■■□□ 2.29
SDCBP2-204ENST00000381812 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
SDCBP2-204ENST00000381812 CLASP1Q7Z460 1538 aa29.29■■■□□ 2.28
SDCBP2-204ENST00000381812 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
SDCBP2-204ENST00000381812 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms