RNA–Protein interactions for RNA: ENST00000460330.5

PTGER3-209, Transcript of prostaglandin E receptor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTGER3, Length 1,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-209ENST00000460330 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
PTGER3-209ENST00000460330 CCDC180Q9P1Z9 1646 aa40.97■■■■■ 4.15
PTGER3-209ENST00000460330 ABCC9O60706 1549 aa39.95■■■■□ 3.99
PTGER3-209ENST00000460330 DCAF8L2P0C7V8 631 aa38.66■■■■□ 3.78
PTGER3-209ENST00000460330 ZCCHC6Q5VYS8 1495 aaKnown RBP38.61■■■■□ 3.77
PTGER3-209ENST00000460330 NACADO15069 1562 aa38.5■■■■□ 3.75
PTGER3-209ENST00000460330 RB1CC1Q8TDY2 1594 aa38.48■■■■□ 3.75
PTGER3-209ENST00000460330 MYO15BQ96JP2 1530 aa38.35■■■■□ 3.73
PTGER3-209ENST00000460330 DCAF1Q9Y4B6 1507 aa38.29■■■■□ 3.72
PTGER3-209ENST00000460330 UNC13AQ9UPW8 1703 aa37.6■■■■□ 3.61
PTGER3-209ENST00000460330 SCRIBQ14160 1630 aa37.47■■■■□ 3.59
PTGER3-209ENST00000460330 PABPN1Q86U42 306 aaKnown RBP eCLIP37.43■■■■□ 3.58
PTGER3-209ENST00000460330 BICRAQ9NZM4 1560 aa37.35■■■■□ 3.57
PTGER3-209ENST00000460330 SHROOM4Q9ULL8 1493 aa36.91■■■■□ 3.5
PTGER3-209ENST00000460330 DNAJC5BQ9UF47 199 aa36.52■■■■□ 3.44
PTGER3-209ENST00000460330 EIF4G1Q04637 1599 aaKnown RBP36.32■■■■□ 3.41
PTGER3-209ENST00000460330 CC2D2AQ9P2K1 1620 aa36.12■■■■□ 3.37
PTGER3-209ENST00000460330 CECR2Q9BXF3 1484 aa36.09■■■■□ 3.37
PTGER3-209ENST00000460330 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
PTGER3-209ENST00000460330 BAZ1AQ9NRL2 1556 aaPredicted RBP35.84■■■■□ 3.33
PTGER3-209ENST00000460330 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
PTGER3-209ENST00000460330 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
PTGER3-209ENST00000460330 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
PTGER3-209ENST00000460330 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
PTGER3-209ENST00000460330 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
PTGER3-209ENST00000460330 RSF1Q96T23 1441 aaPredicted RBP35.41■■■■□ 3.26
PTGER3-209ENST00000460330 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
PTGER3-209ENST00000460330 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
PTGER3-209ENST00000460330 WIZO95785 1651 aa35.31■■■■□ 3.24
PTGER3-209ENST00000460330 TOP2AP11388 1531 aaKnown RBP34.93■■■■□ 3.18
PTGER3-209ENST00000460330 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
PTGER3-209ENST00000460330 NESP48681 1621 aa34.66■■■■□ 3.14
PTGER3-209ENST00000460330 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
PTGER3-209ENST00000460330 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
PTGER3-209ENST00000460330 LAMC3Q9Y6N6 1575 aa34.54■■■■□ 3.12
PTGER3-209ENST00000460330 CFTRP13569 1480 aa34.39■■■■□ 3.1
PTGER3-209ENST00000460330 ERCC6Q03468 1493 aa34.38■■■■□ 3.09
PTGER3-209ENST00000460330 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
PTGER3-209ENST00000460330 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
PTGER3-209ENST00000460330 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
PTGER3-209ENST00000460330 CEP164Q9UPV0 1460 aa34.05■■■■□ 3.04
PTGER3-209ENST00000460330 PRDM2Q13029 1718 aa34.04■■■■□ 3.04
PTGER3-209ENST00000460330 THOC2Q8NI27 1593 aaKnown RBP34.01■■■■□ 3.04
PTGER3-209ENST00000460330 MRC2Q9UBG0 1479 aa33.96■■■■□ 3.03
PTGER3-209ENST00000460330 CUX2O14529 1486 aa33.91■■■■□ 3.02
PTGER3-209ENST00000460330 WDR62O43379 1518 aa33.83■■■■□ 3.01
PTGER3-209ENST00000460330 URB2Q14146 1524 aaKnown RBP33.8■■■■□ 3
PTGER3-209ENST00000460330 TOPBP1Q92547 1522 aa33.62■■■□□ 2.97
PTGER3-209ENST00000460330 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
PTGER3-209ENST00000460330 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
PTGER3-209ENST00000460330 CUX1P39880 1505 aa33.48■■■□□ 2.95
PTGER3-209ENST00000460330 POLA1P09884 1462 aaPredicted RBP33.36■■■□□ 2.93
PTGER3-209ENST00000460330 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.93
PTGER3-209ENST00000460330 IFT140Q96RY7 1462 aa33.33■■■□□ 2.93
PTGER3-209ENST00000460330 FGD5Q6ZNL6 1462 aa33.32■■■□□ 2.92
PTGER3-209ENST00000460330 SYNJ1O43426 1573 aa33.25■■■□□ 2.91
PTGER3-209ENST00000460330 RAD54L2Q9Y4B4 1467 aa33.24■■■□□ 2.91
PTGER3-209ENST00000460330 SOGA1O94964 1423 aa33.24■■■□□ 2.91
PTGER3-209ENST00000460330 TARBP1Q13395 1621 aaKnown RBP33.23■■■□□ 2.91
PTGER3-209ENST00000460330 TOP2BQ02880 1626 aa33.22■■■□□ 2.91
PTGER3-209ENST00000460330 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
PTGER3-209ENST00000460330 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
PTGER3-209ENST00000460330 AQRO60306 1485 aaKnown RBP eCLIP33.06■■■□□ 2.88
PTGER3-209ENST00000460330 TDRD9Q8NDG6 1382 aaKnown RBP33.05■■■□□ 2.88
PTGER3-209ENST00000460330 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
PTGER3-209ENST00000460330 ABCA10Q8WWZ4 1543 aa33■■■□□ 2.87
PTGER3-209ENST00000460330 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
PTGER3-209ENST00000460330 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
PTGER3-209ENST00000460330 ABCA5Q8WWZ7 1642 aa32.81■■■□□ 2.84
PTGER3-209ENST00000460330 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
PTGER3-209ENST00000460330 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
PTGER3-209ENST00000460330 SNAPC4Q5SXM2 1469 aa32.72■■■□□ 2.83
PTGER3-209ENST00000460330 PBRM1Q86U86 1689 aa32.7■■■□□ 2.82
PTGER3-209ENST00000460330 MAGI1Q96QZ7 1491 aaPredicted RBP32.67■■■□□ 2.82
PTGER3-209ENST00000460330 DNAJC5Q9H3Z4 198 aa32.66■■■□□ 2.82
PTGER3-209ENST00000460330 FBLN2P98095 1184 aa32.63■■■□□ 2.81
PTGER3-209ENST00000460330 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
PTGER3-209ENST00000460330 OSCARQ8IYS5 282 aa32.62■■■□□ 2.81
PTGER3-209ENST00000460330 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
PTGER3-209ENST00000460330 CHIC1Q5VXU3 224 aa32.57■■■□□ 2.8
PTGER3-209ENST00000460330 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
PTGER3-209ENST00000460330 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
PTGER3-209ENST00000460330 CHD1O14646 1710 aa32.55■■■□□ 2.8
PTGER3-209ENST00000460330 IGF1RP08069 1367 aa32.51■■■□□ 2.79
PTGER3-209ENST00000460330 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
PTGER3-209ENST00000460330 FHAD1B1AJZ9 1412 aa32.48■■■□□ 2.79
PTGER3-209ENST00000460330 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
PTGER3-209ENST00000460330 GRIN2AQ12879 1464 aa32.38■■■□□ 2.77
PTGER3-209ENST00000460330 CUL7Q14999 1698 aa32.31■■■□□ 2.76
PTGER3-209ENST00000460330 CARMIL1Q5VZK9 1371 aa32.31■■■□□ 2.76
PTGER3-209ENST00000460330 NUP160Q12769 1436 aa32.23■■■□□ 2.75
PTGER3-209ENST00000460330 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
PTGER3-209ENST00000460330 CEP170Q5SW79 1584 aa32.2■■■□□ 2.75
PTGER3-209ENST00000460330 EEA1Q15075 1411 aa32.14■■■□□ 2.74
PTGER3-209ENST00000460330 CSRNP3Q8WYN3 585 aa32.14■■■□□ 2.74
PTGER3-209ENST00000460330 FAM9AQ8IZU1 332 aaPredicted RBP32.12■■■□□ 2.73
PTGER3-209ENST00000460330 RAPGEF2Q9Y4G8 1499 aa32.11■■■□□ 2.73
PTGER3-209ENST00000460330 PRXQ9BXM0 1461 aa32.07■■■□□ 2.72
PTGER3-209ENST00000460330 ARHGEF11O15085 1522 aa32.05■■■□□ 2.72
PTGER3-209ENST00000460330 RIMBP3CA6NJZ7 1639 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms