Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AC091304.2-201ENST00000564639 760 ntBASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AL732292.2-201ENST00000609649 430 ntBASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 AC080080.1-201ENST00000625121 2420 ntBASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDRT4Q8N9R6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 LINC01711-201ENST00000598340 967 ntBASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDRT4Q8N9R6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 PRYP5-201ENST00000451909 266 ntBASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 AC124947.2-201ENST00000547118 1133 ntBASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDRT4Q8N9R6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDRT4Q8N9R6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms