RNA–Protein interactions for RNA: ENST00000349697.2

KCNMB3-202, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KCNMB3, Length 1,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-202ENST00000349697 NISCHQ9Y2I1 1504 aa45.63■■■■■ 4.9
KCNMB3-202ENST00000349697 ABCC9O60706 1549 aa41.19■■■■■ 4.18
KCNMB3-202ENST00000349697 CCDC180Q9P1Z9 1646 aa41.05■■■■■ 4.16
KCNMB3-202ENST00000349697 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
KCNMB3-202ENST00000349697 NACADO15069 1562 aa38.86■■■■□ 3.81
KCNMB3-202ENST00000349697 DNAJC5BQ9UF47 199 aa38.82■■■■□ 3.8
KCNMB3-202ENST00000349697 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
KCNMB3-202ENST00000349697 PABPN1Q86U42 306 aaKnown RBP eCLIP38.3■■■■□ 3.72
KCNMB3-202ENST00000349697 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
KCNMB3-202ENST00000349697 UNC13AQ9UPW8 1703 aa38.26■■■■□ 3.71
KCNMB3-202ENST00000349697 BICRAQ9NZM4 1560 aa38.03■■■■□ 3.68
KCNMB3-202ENST00000349697 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
KCNMB3-202ENST00000349697 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
KCNMB3-202ENST00000349697 SHROOM4Q9ULL8 1493 aa37.54■■■■□ 3.6
KCNMB3-202ENST00000349697 SCRIBQ14160 1630 aa37.34■■■■□ 3.57
KCNMB3-202ENST00000349697 CC2D2AQ9P2K1 1620 aa37.22■■■■□ 3.55
KCNMB3-202ENST00000349697 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
KCNMB3-202ENST00000349697 EIF4G1Q04637 1599 aaKnown RBP37.1■■■■□ 3.53
KCNMB3-202ENST00000349697 NCAPD3P42695 1498 aa35.87■■■■□ 3.33
KCNMB3-202ENST00000349697 DNAJC5Q9H3Z4 198 aa35.83■■■■□ 3.33
KCNMB3-202ENST00000349697 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
KCNMB3-202ENST00000349697 CUX2O14529 1486 aa35.63■■■■□ 3.29
KCNMB3-202ENST00000349697 SMARCA4P51532 1647 aa35.63■■■■□ 3.29
KCNMB3-202ENST00000349697 SMARCA2P51531 1590 aa35.62■■■■□ 3.29
KCNMB3-202ENST00000349697 HMGXB3Q12766 1538 aa35.59■■■■□ 3.29
KCNMB3-202ENST00000349697 ERCC6Q03468 1493 aa35.59■■■■□ 3.29
KCNMB3-202ENST00000349697 BAZ1AQ9NRL2 1556 aaPredicted RBP35.43■■■■□ 3.26
KCNMB3-202ENST00000349697 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
KCNMB3-202ENST00000349697 NESP48681 1621 aa35.33■■■■□ 3.25
KCNMB3-202ENST00000349697 PEG3Q9GZU2 1588 aa35.32■■■■□ 3.24
KCNMB3-202ENST00000349697 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
KCNMB3-202ENST00000349697 LAMC3Q9Y6N6 1575 aa35.09■■■■□ 3.21
KCNMB3-202ENST00000349697 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
KCNMB3-202ENST00000349697 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
KCNMB3-202ENST00000349697 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
KCNMB3-202ENST00000349697 CADPSQ9ULU8 1353 aa34.75■■■■□ 3.15
KCNMB3-202ENST00000349697 WIZO95785 1651 aa34.7■■■■□ 3.14
KCNMB3-202ENST00000349697 MRC2Q9UBG0 1479 aa34.59■■■■□ 3.13
KCNMB3-202ENST00000349697 WDR62O43379 1518 aa34.52■■■■□ 3.12
KCNMB3-202ENST00000349697 CEP164Q9UPV0 1460 aa34.41■■■■□ 3.1
KCNMB3-202ENST00000349697 FANCD2Q9BXW9 1451 aa34.35■■■■□ 3.09
KCNMB3-202ENST00000349697 RSF1Q96T23 1441 aaPredicted RBP34.34■■■■□ 3.09
KCNMB3-202ENST00000349697 CFTRP13569 1480 aa34.33■■■■□ 3.09
KCNMB3-202ENST00000349697 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
KCNMB3-202ENST00000349697 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
KCNMB3-202ENST00000349697 URB2Q14146 1524 aaKnown RBP34.09■■■■□ 3.05
KCNMB3-202ENST00000349697 PRDM2Q13029 1718 aa33.96■■■■□ 3.03
KCNMB3-202ENST00000349697 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
KCNMB3-202ENST00000349697 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
KCNMB3-202ENST00000349697 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
KCNMB3-202ENST00000349697 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
KCNMB3-202ENST00000349697 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
KCNMB3-202ENST00000349697 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
KCNMB3-202ENST00000349697 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
KCNMB3-202ENST00000349697 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
KCNMB3-202ENST00000349697 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
KCNMB3-202ENST00000349697 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
KCNMB3-202ENST00000349697 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.95
KCNMB3-202ENST00000349697 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
KCNMB3-202ENST00000349697 ARHGEF11O15085 1522 aa33.41■■■□□ 2.94
KCNMB3-202ENST00000349697 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.93
KCNMB3-202ENST00000349697 POLA1P09884 1462 aaPredicted RBP33.33■■■□□ 2.93
KCNMB3-202ENST00000349697 CHD1O14646 1710 aa33.28■■■□□ 2.92
KCNMB3-202ENST00000349697 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
KCNMB3-202ENST00000349697 SOGA1O94964 1423 aa33.17■■■□□ 2.9
KCNMB3-202ENST00000349697 FBLN2P98095 1184 aa33.15■■■□□ 2.9
KCNMB3-202ENST00000349697 CYB5RLQ6IPT4 315 aa33.15■■■□□ 2.9
KCNMB3-202ENST00000349697 TDRD9Q8NDG6 1382 aaKnown RBP33.12■■■□□ 2.89
KCNMB3-202ENST00000349697 WDR97A6NE52 1622 aa33.09■■■□□ 2.89
KCNMB3-202ENST00000349697 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
KCNMB3-202ENST00000349697 ARAP1Q96P48 1450 aa33.06■■■□□ 2.88
KCNMB3-202ENST00000349697 CUX1P39880 1505 aa33.02■■■□□ 2.88
KCNMB3-202ENST00000349697 SNAPC4Q5SXM2 1469 aa33■■■□□ 2.87
KCNMB3-202ENST00000349697 MAGI1Q96QZ7 1491 aaPredicted RBP32.94■■■□□ 2.86
KCNMB3-202ENST00000349697 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
KCNMB3-202ENST00000349697 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
KCNMB3-202ENST00000349697 CHMP7Q8WUX9 453 aaPredicted RBP32.9■■■□□ 2.86
KCNMB3-202ENST00000349697 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
KCNMB3-202ENST00000349697 SYNJ2O15056 1496 aa32.84■■■□□ 2.85
KCNMB3-202ENST00000349697 TRHP20396 242 aaPredicted RBP32.83■■■□□ 2.85
KCNMB3-202ENST00000349697 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
KCNMB3-202ENST00000349697 GAPVD1Q14C86 1478 aa32.76■■■□□ 2.84
KCNMB3-202ENST00000349697 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
KCNMB3-202ENST00000349697 ABCA5Q8WWZ7 1642 aa32.69■■■□□ 2.82
KCNMB3-202ENST00000349697 SUPT5HO00267 1087 aaKnown RBP32.62■■■□□ 2.81
KCNMB3-202ENST00000349697 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
KCNMB3-202ENST00000349697 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
KCNMB3-202ENST00000349697 BIVM-ERCC5R4GMW8 1640 aa32.47■■■□□ 2.79
KCNMB3-202ENST00000349697 TOP2BQ02880 1626 aa32.46■■■□□ 2.79
KCNMB3-202ENST00000349697 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
KCNMB3-202ENST00000349697 NUP160Q12769 1436 aa32.4■■■□□ 2.78
KCNMB3-202ENST00000349697 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
KCNMB3-202ENST00000349697 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
KCNMB3-202ENST00000349697 FHAD1B1AJZ9 1412 aa32.35■■■□□ 2.77
KCNMB3-202ENST00000349697 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
KCNMB3-202ENST00000349697 SHROOM2Q13796 1616 aa32.29■■■□□ 2.76
KCNMB3-202ENST00000349697 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
KCNMB3-202ENST00000349697 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
KCNMB3-202ENST00000349697 AEBP2Q6ZN18 517 aaPredicted RBP32.02■■■□□ 2.72
KCNMB3-202ENST00000349697 RUSC2Q8N2Y8 1516 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms