RNA–Protein interactions for RNA: ENST00000429635.1

AMIGO2-202, Transcript of adhesion molecule with Ig like domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMIGO2, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO2-202ENST00000429635 NISCHQ9Y2I1 1504 aa35.11■■■■□ 3.21
AMIGO2-202ENST00000429635 SHROOM4Q9ULL8 1493 aa30.64■■■□□ 2.5
AMIGO2-202ENST00000429635 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
AMIGO2-202ENST00000429635 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
AMIGO2-202ENST00000429635 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
AMIGO2-202ENST00000429635 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
AMIGO2-202ENST00000429635 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
AMIGO2-202ENST00000429635 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
AMIGO2-202ENST00000429635 HRCP23327 699 aa29.14■■■□□ 2.25
AMIGO2-202ENST00000429635 PCGF6Q9BYE7 350 aa28.98■■■□□ 2.23
AMIGO2-202ENST00000429635 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
AMIGO2-202ENST00000429635 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
AMIGO2-202ENST00000429635 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
AMIGO2-202ENST00000429635 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
AMIGO2-202ENST00000429635 ABCC9O60706 1549 aa28.19■■■□□ 2.1
AMIGO2-202ENST00000429635 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
AMIGO2-202ENST00000429635 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
AMIGO2-202ENST00000429635 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
AMIGO2-202ENST00000429635 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
AMIGO2-202ENST00000429635 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
AMIGO2-202ENST00000429635 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
AMIGO2-202ENST00000429635 ZEB1P37275 1124 aaPredicted RBP27.63■■■□□ 2.01
AMIGO2-202ENST00000429635 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
AMIGO2-202ENST00000429635 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
AMIGO2-202ENST00000429635 TTBK1Q5TCY1 1321 aaPredicted RBP27.39■■□□□ 1.98
AMIGO2-202ENST00000429635 NACADO15069 1562 aa27.37■■□□□ 1.97
AMIGO2-202ENST00000429635 WIZO95785 1651 aa27.33■■□□□ 1.97
AMIGO2-202ENST00000429635 SCAF1Q9H7N4 1312 aaKnown RBP27.2■■□□□ 1.94
AMIGO2-202ENST00000429635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.93
AMIGO2-202ENST00000429635 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
AMIGO2-202ENST00000429635 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
AMIGO2-202ENST00000429635 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
AMIGO2-202ENST00000429635 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
AMIGO2-202ENST00000429635 PELP1Q8IZL8 1130 aaKnown RBP26.86■■□□□ 1.89
AMIGO2-202ENST00000429635 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
AMIGO2-202ENST00000429635 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.87
AMIGO2-202ENST00000429635 CEP162Q5TB80 1403 aa26.74■■□□□ 1.87
AMIGO2-202ENST00000429635 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
AMIGO2-202ENST00000429635 ACIN1Q9UKV3 1341 aaKnown RBP26.72■■□□□ 1.87
AMIGO2-202ENST00000429635 SOGA1O94964 1423 aa26.71■■□□□ 1.87
AMIGO2-202ENST00000429635 DIEXFQ68CQ4 756 aaKnown RBP26.69■■□□□ 1.86
AMIGO2-202ENST00000429635 WRNQ14191 1432 aaPredicted RBP eCLIP26.69■■□□□ 1.86
AMIGO2-202ENST00000429635 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
AMIGO2-202ENST00000429635 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
AMIGO2-202ENST00000429635 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
AMIGO2-202ENST00000429635 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.85
AMIGO2-202ENST00000429635 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
AMIGO2-202ENST00000429635 TNIKQ9UKE5 1360 aa26.57■■□□□ 1.84
AMIGO2-202ENST00000429635 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
AMIGO2-202ENST00000429635 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
AMIGO2-202ENST00000429635 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
AMIGO2-202ENST00000429635 GTF3C3Q9Y5Q9 886 aa26.5■■□□□ 1.83
AMIGO2-202ENST00000429635 CENPBP07199 599 aaPredicted RBP26.46■■□□□ 1.83
AMIGO2-202ENST00000429635 EEA1Q15075 1411 aa26.41■■□□□ 1.82
AMIGO2-202ENST00000429635 GOLGA3Q08378 1498 aa26.38■■□□□ 1.81
AMIGO2-202ENST00000429635 ZNF316A6NFI3 1004 aaPredicted RBP26.33■■□□□ 1.81
AMIGO2-202ENST00000429635 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
AMIGO2-202ENST00000429635 YTHDC1Q96MU7 727 aaKnown RBP26.25■■□□□ 1.79
AMIGO2-202ENST00000429635 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
AMIGO2-202ENST00000429635 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
AMIGO2-202ENST00000429635 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
AMIGO2-202ENST00000429635 CLIP1P30622 1438 aa26.14■■□□□ 1.78
AMIGO2-202ENST00000429635 KIF21BO75037 1637 aa26.11■■□□□ 1.77
AMIGO2-202ENST00000429635 MIER1Q8N108 512 aa26.11■■□□□ 1.77
AMIGO2-202ENST00000429635 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
AMIGO2-202ENST00000429635 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
AMIGO2-202ENST00000429635 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
AMIGO2-202ENST00000429635 APLP2Q06481 763 aa26■■□□□ 1.75
AMIGO2-202ENST00000429635 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
AMIGO2-202ENST00000429635 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
AMIGO2-202ENST00000429635 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
AMIGO2-202ENST00000429635 DHX57Q6P158 1386 aaKnown RBP25.7■■□□□ 1.7
AMIGO2-202ENST00000429635 ITGAEP38570 1179 aa25.69■■□□□ 1.7
AMIGO2-202ENST00000429635 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
AMIGO2-202ENST00000429635 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
AMIGO2-202ENST00000429635 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
AMIGO2-202ENST00000429635 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
AMIGO2-202ENST00000429635 ERICH3Q5RHP9 1530 aa25.59■■□□□ 1.69
AMIGO2-202ENST00000429635 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.68
AMIGO2-202ENST00000429635 MYT1Q01538 1121 aa25.52■■□□□ 1.68
AMIGO2-202ENST00000429635 CUX1P39880 1505 aa25.47■■□□□ 1.67
AMIGO2-202ENST00000429635 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
AMIGO2-202ENST00000429635 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
AMIGO2-202ENST00000429635 SUPT16HQ9Y5B9 1047 aaKnown RBP25.4■■□□□ 1.66
AMIGO2-202ENST00000429635 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.66
AMIGO2-202ENST00000429635 NCAPD3P42695 1498 aa25.39■■□□□ 1.66
AMIGO2-202ENST00000429635 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
AMIGO2-202ENST00000429635 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
AMIGO2-202ENST00000429635 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
AMIGO2-202ENST00000429635 CUX2O14529 1486 aa25.33■■□□□ 1.64
AMIGO2-202ENST00000429635 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
AMIGO2-202ENST00000429635 CFTRP13569 1480 aa25.28■■□□□ 1.64
AMIGO2-202ENST00000429635 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
AMIGO2-202ENST00000429635 RAB3GAP2Q9H2M9 1393 aa25.26■■□□□ 1.63
AMIGO2-202ENST00000429635 MAPKBP1O60336 1514 aa25.21■■□□□ 1.63
AMIGO2-202ENST00000429635 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
AMIGO2-202ENST00000429635 IGF1RP08069 1367 aa25.13■■□□□ 1.61
AMIGO2-202ENST00000429635 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
AMIGO2-202ENST00000429635 HIRIP3Q9BW71 556 aaPredicted RBP25.11■■□□□ 1.61
AMIGO2-202ENST00000429635 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms