Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 RPL4-214ENST00000567229 2003 ntTSL 517.94■□□□□ 0.461e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-213ENST00000566624 819 ntTSL 217.73■□□□□ 0.431e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-217ENST00000569696 569 ntTSL 517.73■□□□□ 0.431e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-202ENST00000561554 580 ntTSL 417.59■□□□□ 0.411e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC17.13■□□□□ 0.331e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-205ENST00000564439 582 ntTSL 316.48■□□□□ 0.231e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.011e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-210ENST00000566039 1099 ntTSL 213.87□□□□□ -0.191e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-203ENST00000561775 1396 ntTSL 511.74□□□□□ -0.531e-19■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-205ENST00000507010 748 ntTSL 338.57■■■■□ 3.771e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-209ENST00000513584 1240 ntTSL 236.54■■■■□ 3.441e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC35.96■■■■□ 3.351e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-204ENST00000503822 607 ntTSL 535.64■■■■□ 3.31e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC34.26■■■■□ 3.081e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-207ENST00000509107 583 ntTSL 532.15■■■□□ 2.741e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.371e-10■□□□□ 9.6
DROSHAQ9NRR4 HNRNPD-212ENST00000515432 545 ntTSL 512.64□□□□□ -0.391e-10■□□□□ 9.6
DROSHAQ9NRR4 MRPS16-204ENST00000473427 612 ntTSL 328.02■■■□□ 2.083e-6■□□□□ 9.6
DROSHAQ9NRR4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC26.32■■□□□ 1.83e-6■□□□□ 9.6
DROSHAQ9NRR4 MRPS16-205ENST00000479005 2580 ntTSL 220■□□□□ 0.793e-6■□□□□ 9.6
DROSHAQ9NRR4 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.753e-6■□□□□ 9.6
DROSHAQ9NRR4 HGFAC-203ENST00000509689 1894 ntTSL 530.81■■■□□ 2.522e-9■□□□□ 9.6
DROSHAQ9NRR4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC28.85■■■□□ 2.212e-9■□□□□ 9.6
DROSHAQ9NRR4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.842e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-209ENST00000489525 1339 ntTSL 537.59■■■■□ 3.615e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC36.68■■■■□ 3.465e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC36.61■■■■□ 3.455e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.37■■■■□ 3.255e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-208ENST00000481047 775 ntTSL 235.37■■■■□ 3.255e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.55■■■□□ 2.85e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-213ENST00000617138 635 ntTSL 2 BASIC32.11■■■□□ 2.735e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.81■■■□□ 2.685e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-212ENST00000533952 477 ntAPPRIS ALT2 TSL 330.81■■■□□ 2.525e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC29.71■■■□□ 2.355e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-210ENST00000490240 603 ntTSL 1 (best)29.71■■■□□ 2.355e-9■□□□□ 9.6
DROSHAQ9NRR4 MDK-211ENST00000533283 498 ntTSL 323.72■■□□□ 1.395e-9■□□□□ 9.6
DROSHAQ9NRR4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC43.37■■■■■ 4.539e-6■□□□□ 9.6
DROSHAQ9NRR4 SMARCD2-210ENST00000584400 1017 ntTSL 341.6■■■■■ 4.259e-6■□□□□ 9.6
DROSHAQ9NRR4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC39.06■■■■□ 3.849e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-222ENST00000533376 496 ntTSL 538.08■■■■□ 3.699e-6■□□□□ 9.6
DROSHAQ9NRR4 NUP188-209ENST00000491990 381 ntTSL 535.88■■■■□ 3.339e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.269e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC35.16■■■■□ 3.229e-6■□□□□ 9.6
DROSHAQ9NRR4 SPG7-217ENST00000568151 544 ntTSL 434.95■■■■□ 3.191e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC33.34■■■□□ 2.939e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC33.34■■■□□ 2.939e-6■□□□□ 9.6
DROSHAQ9NRR4 SPG7-214ENST00000566371 581 ntTSL 333.21■■■□□ 2.911e-6■□□□□ 9.6
DROSHAQ9NRR4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.879e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-212ENST00000492213 550 ntTSL 432.73■■■□□ 2.839e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-206ENST00000443002 1890 ntTSL 232.62■■■□□ 2.819e-6■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-207ENST00000473925 804 ntTSL 232.25■■■□□ 2.759e-6■□□□□ 9.6
DROSHAQ9NRR4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.759e-6■□□□□ 9.6
DROSHAQ9NRR4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.2■■■□□ 2.759e-6■□□□□ 9.6
DROSHAQ9NRR4 IRF3-214ENST00000596788 447 ntTSL 331.9■■■□□ 2.79e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-209ENST00000566119 479 ntTSL 431.55■■■□□ 2.642e-11■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-208ENST00000483307 688 ntTSL 231.22■■■□□ 2.599e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.549e-6■□□□□ 9.6
DROSHAQ9NRR4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.539e-6■□□□□ 9.6
DROSHAQ9NRR4 HGS-203ENST00000570652 523 ntTSL 530.82■■■□□ 2.529e-6■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-212ENST00000527674 1785 ntTSL 230.41■■■□□ 2.469e-6■□□□□ 9.6
DROSHAQ9NRR4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC29.41■■■□□ 2.31e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-211ENST00000566243 711 ntTSL 329.25■■■□□ 2.272e-11■□□□□ 9.6
DROSHAQ9NRR4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC28.73■■■□□ 2.199e-6■□□□□ 9.6
DROSHAQ9NRR4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.119e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.112e-11■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.19e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-208ENST00000565602 1862 ntTSL 527.84■■■□□ 2.052e-11■□□□□ 9.6
DROSHAQ9NRR4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.999e-6■□□□□ 9.6
DROSHAQ9NRR4 TP73-AS1-210ENST00000637775 1455 ntBASIC27.2■■□□□ 1.959e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-229ENST00000599766 747 ntTSL 327.17■■□□□ 1.949e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-215ENST00000569007 379 ntTSL 226.85■■□□□ 1.892e-11■□□□□ 9.6
DROSHAQ9NRR4 MELTF-207ENST00000491399 556 ntTSL 226.33■■□□□ 1.819e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-212ENST00000566828 574 ntTSL 426.01■■□□□ 1.752e-11■□□□□ 9.6
DROSHAQ9NRR4 EDC3-216ENST00000569561 658 ntTSL 525.69■■□□□ 1.72e-11■□□□□ 9.6
DROSHAQ9NRR4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC25.66■■□□□ 1.79e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.682e-11■□□□□ 9.6
DROSHAQ9NRR4 EDC3-210ENST00000566219 688 ntTSL 325.42■■□□□ 1.662e-11■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.639e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-212ENST00000481876 822 ntTSL 325.05■■□□□ 1.69e-6■□□□□ 9.6
DROSHAQ9NRR4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC25.01■■□□□ 1.599e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-205ENST00000413686 769 ntTSL 324.84■■□□□ 1.579e-6■□□□□ 9.6
DROSHAQ9NRR4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.568e-9■□□□□ 9.6
DROSHAQ9NRR4 COX6A1-203ENST00000550009 572 ntTSL 224.8■■□□□ 1.568e-9■□□□□ 9.6
DROSHAQ9NRR4 IRF3-210ENST00000595240 567 ntTSL 224.63■■□□□ 1.539e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-209ENST00000483713 615 ntTSL 324.28■■□□□ 1.489e-6■□□□□ 9.6
DROSHAQ9NRR4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC24.03■■□□□ 1.449e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.99■■□□□ 1.439e-6■□□□□ 9.6
DROSHAQ9NRR4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.439e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-210ENST00000472137 859 ntTSL 523.8■■□□□ 1.49e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-204ENST00000344036 681 ntTSL 323.67■■□□□ 1.389e-6■□□□□ 9.6
DROSHAQ9NRR4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC23.46■■□□□ 1.359e-6■□□□□ 9.6
DROSHAQ9NRR4 EDC3-206ENST00000563009 967 ntTSL 323.42■■□□□ 1.342e-11■□□□□ 9.6
DROSHAQ9NRR4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.3■■□□□ 1.329e-6■□□□□ 9.6
DROSHAQ9NRR4 HGS-210ENST00000573320 547 ntTSL 323.2■■□□□ 1.39e-6■□□□□ 9.6
DROSHAQ9NRR4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC23.11■■□□□ 1.299e-6■□□□□ 9.6
DROSHAQ9NRR4 EIF3B-210ENST00000468611 1868 ntTSL 222.96■■□□□ 1.279e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-208ENST00000468285 850 ntTSL 222.96■■□□□ 1.279e-6■□□□□ 9.6
DROSHAQ9NRR4 VDAC2-211ENST00000475142 819 ntTSL 322.96■■□□□ 1.279e-6■□□□□ 9.6
DROSHAQ9NRR4 FCHO1-236ENST00000602111 781 ntTSL 322.93■■□□□ 1.269e-6■□□□□ 9.6
DROSHAQ9NRR4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.85■■□□□ 1.259e-6■□□□□ 9.6
Retrieved 100 of 16,331 protein–RNA pairs in 48.1 ms