RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.2
EDC3-212ENST00000566828 ABCC9O60706 1549 aa37.56■■■■□ 3.6
EDC3-212ENST00000566828 CCDC180Q9P1Z9 1646 aa37.31■■■■□ 3.56
EDC3-212ENST00000566828 RB1CC1Q8TDY2 1594 aa35.61■■■■□ 3.29
EDC3-212ENST00000566828 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
EDC3-212ENST00000566828 NACADO15069 1562 aa35.24■■■■□ 3.23
EDC3-212ENST00000566828 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
EDC3-212ENST00000566828 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
EDC3-212ENST00000566828 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
EDC3-212ENST00000566828 BICRAQ9NZM4 1560 aa34.62■■■■□ 3.13
EDC3-212ENST00000566828 MYO15BQ96JP2 1530 aa34.59■■■■□ 3.13
EDC3-212ENST00000566828 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
EDC3-212ENST00000566828 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
EDC3-212ENST00000566828 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
EDC3-212ENST00000566828 SCRIBQ14160 1630 aa33.98■■■■□ 3.03
EDC3-212ENST00000566828 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
EDC3-212ENST00000566828 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
EDC3-212ENST00000566828 EIF4G1Q04637 1599 aaKnown RBP33.78■■■■□ 3
EDC3-212ENST00000566828 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
EDC3-212ENST00000566828 CUX2O14529 1486 aa32.48■■■□□ 2.79
EDC3-212ENST00000566828 NCAPD3P42695 1498 aa32.47■■■□□ 2.79
EDC3-212ENST00000566828 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
EDC3-212ENST00000566828 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
EDC3-212ENST00000566828 SMARCA4P51532 1647 aa32.35■■■□□ 2.77
EDC3-212ENST00000566828 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
EDC3-212ENST00000566828 SMARCA2P51531 1590 aa32.29■■■□□ 2.76
EDC3-212ENST00000566828 NESP48681 1621 aa32.18■■■□□ 2.74
EDC3-212ENST00000566828 BAZ1AQ9NRL2 1556 aaPredicted RBP32.08■■■□□ 2.73
EDC3-212ENST00000566828 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
EDC3-212ENST00000566828 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
EDC3-212ENST00000566828 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
EDC3-212ENST00000566828 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
EDC3-212ENST00000566828 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
EDC3-212ENST00000566828 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
EDC3-212ENST00000566828 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
EDC3-212ENST00000566828 WIZO95785 1651 aa31.49■■■□□ 2.63
EDC3-212ENST00000566828 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.62
EDC3-212ENST00000566828 CADPSQ9ULU8 1353 aa31.44■■■□□ 2.62
EDC3-212ENST00000566828 WDR62O43379 1518 aa31.43■■■□□ 2.62
EDC3-212ENST00000566828 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
EDC3-212ENST00000566828 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
EDC3-212ENST00000566828 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
EDC3-212ENST00000566828 CFTRP13569 1480 aa31.06■■■□□ 2.56
EDC3-212ENST00000566828 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
EDC3-212ENST00000566828 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
EDC3-212ENST00000566828 URB2Q14146 1524 aaKnown RBP30.97■■■□□ 2.55
EDC3-212ENST00000566828 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
EDC3-212ENST00000566828 OSCARQ8IYS5 282 aa30.79■■■□□ 2.52
EDC3-212ENST00000566828 RIMBP3CA6NJZ7 1639 aa30.68■■■□□ 2.5
EDC3-212ENST00000566828 RIMBP3BA6NNM3 1639 aa30.68■■■□□ 2.5
EDC3-212ENST00000566828 RIMBP3Q9UFD9 1639 aa30.68■■■□□ 2.5
EDC3-212ENST00000566828 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
EDC3-212ENST00000566828 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
EDC3-212ENST00000566828 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
EDC3-212ENST00000566828 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
EDC3-212ENST00000566828 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
EDC3-212ENST00000566828 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
EDC3-212ENST00000566828 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.47
EDC3-212ENST00000566828 CHD1O14646 1710 aa30.44■■■□□ 2.46
EDC3-212ENST00000566828 ABCC8Q09428 1581 aa30.39■■■□□ 2.46
EDC3-212ENST00000566828 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
EDC3-212ENST00000566828 AQRO60306 1485 aaKnown RBP eCLIP30.26■■■□□ 2.44
EDC3-212ENST00000566828 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
EDC3-212ENST00000566828 ARAP1Q96P48 1450 aa30.17■■■□□ 2.42
EDC3-212ENST00000566828 CYB5RLQ6IPT4 315 aa30.13■■■□□ 2.41
EDC3-212ENST00000566828 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
EDC3-212ENST00000566828 FBLN2P98095 1184 aa30.08■■■□□ 2.41
EDC3-212ENST00000566828 SNAPC4Q5SXM2 1469 aa30.02■■■□□ 2.4
EDC3-212ENST00000566828 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
EDC3-212ENST00000566828 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
EDC3-212ENST00000566828 SOGA1O94964 1423 aa30■■■□□ 2.39
EDC3-212ENST00000566828 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
EDC3-212ENST00000566828 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
EDC3-212ENST00000566828 TRHP20396 242 aaPredicted RBP29.94■■■□□ 2.38
EDC3-212ENST00000566828 CUX1P39880 1505 aa29.93■■■□□ 2.38
EDC3-212ENST00000566828 SYNJ1O43426 1573 aa29.92■■■□□ 2.38
EDC3-212ENST00000566828 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
EDC3-212ENST00000566828 MAGI1Q96QZ7 1491 aaPredicted RBP29.88■■■□□ 2.37
EDC3-212ENST00000566828 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
EDC3-212ENST00000566828 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
EDC3-212ENST00000566828 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
EDC3-212ENST00000566828 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
EDC3-212ENST00000566828 GAPVD1Q14C86 1478 aa29.68■■■□□ 2.34
EDC3-212ENST00000566828 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
EDC3-212ENST00000566828 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
EDC3-212ENST00000566828 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
EDC3-212ENST00000566828 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
EDC3-212ENST00000566828 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
EDC3-212ENST00000566828 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
EDC3-212ENST00000566828 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
EDC3-212ENST00000566828 SHROOM2Q13796 1616 aa29.37■■■□□ 2.29
EDC3-212ENST00000566828 NUP160Q12769 1436 aa29.37■■■□□ 2.29
EDC3-212ENST00000566828 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
EDC3-212ENST00000566828 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
EDC3-212ENST00000566828 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
EDC3-212ENST00000566828 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
EDC3-212ENST00000566828 ERICH3Q5RHP9 1530 aa29.25■■■□□ 2.27
EDC3-212ENST00000566828 KIF13AQ9H1H9 1805 aa29.23■■■□□ 2.27
EDC3-212ENST00000566828 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
EDC3-212ENST00000566828 PRG4Q92954 1404 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms