RNA–Protein interactions for RNA: ENST00000409540.7

INPP4A-204, Transcript of inositol polyphosphate-4-phosphatase type I A, humanhuman

TSL 1 (best) BASIC

Gene INPP4A, Length 3,231 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INPP4A-204ENST00000409540 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
INPP4A-204ENST00000409540 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
INPP4A-204ENST00000409540 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
INPP4A-204ENST00000409540 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
INPP4A-204ENST00000409540 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
INPP4A-204ENST00000409540 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
INPP4A-204ENST00000409540 HRCP23327 699 aa29.24■■■□□ 2.27
INPP4A-204ENST00000409540 ABCC9O60706 1549 aa29.2■■■□□ 2.26
INPP4A-204ENST00000409540 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
INPP4A-204ENST00000409540 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
INPP4A-204ENST00000409540 NACADO15069 1562 aa28.81■■■□□ 2.2
INPP4A-204ENST00000409540 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.19
INPP4A-204ENST00000409540 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
INPP4A-204ENST00000409540 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
INPP4A-204ENST00000409540 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
INPP4A-204ENST00000409540 PCGF6Q9BYE7 350 aa28.34■■■□□ 2.13
INPP4A-204ENST00000409540 MYT1Q01538 1121 aa28.2■■■□□ 2.11
INPP4A-204ENST00000409540 SCAF1Q9H7N4 1312 aaKnown RBP28.17■■■□□ 2.1
INPP4A-204ENST00000409540 UNC13AQ9UPW8 1703 aa28.06■■■□□ 2.08
INPP4A-204ENST00000409540 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
INPP4A-204ENST00000409540 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
INPP4A-204ENST00000409540 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
INPP4A-204ENST00000409540 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
INPP4A-204ENST00000409540 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
INPP4A-204ENST00000409540 BAZ1AQ9NRL2 1556 aaPredicted RBP27.59■■■□□ 2.01
INPP4A-204ENST00000409540 WIZO95785 1651 aa27.54■■■□□ 2
INPP4A-204ENST00000409540 CHIC1Q5VXU3 224 aa27.51■■□□□ 1.99
INPP4A-204ENST00000409540 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
INPP4A-204ENST00000409540 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
INPP4A-204ENST00000409540 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
INPP4A-204ENST00000409540 NEUROD1Q13562 356 aa27.12■■□□□ 1.93
INPP4A-204ENST00000409540 TRIM26Q12899 539 aaPredicted RBP27.11■■□□□ 1.93
INPP4A-204ENST00000409540 PEG3Q9GZU2 1588 aa27.08■■□□□ 1.92
INPP4A-204ENST00000409540 ZEB1P37275 1124 aaPredicted RBP27.06■■□□□ 1.92
INPP4A-204ENST00000409540 GTF3C3Q9Y5Q9 886 aa27.03■■□□□ 1.92
INPP4A-204ENST00000409540 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
INPP4A-204ENST00000409540 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
INPP4A-204ENST00000409540 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.9
INPP4A-204ENST00000409540 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.89
INPP4A-204ENST00000409540 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
INPP4A-204ENST00000409540 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
INPP4A-204ENST00000409540 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
INPP4A-204ENST00000409540 TTBK1Q5TCY1 1321 aaPredicted RBP26.65■■□□□ 1.86
INPP4A-204ENST00000409540 CENPBP07199 599 aaPredicted RBP26.63■■□□□ 1.85
INPP4A-204ENST00000409540 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
INPP4A-204ENST00000409540 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
INPP4A-204ENST00000409540 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
INPP4A-204ENST00000409540 BCL11AQ9H165 835 aa26.55■■□□□ 1.84
INPP4A-204ENST00000409540 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
INPP4A-204ENST00000409540 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
INPP4A-204ENST00000409540 DIEXFQ68CQ4 756 aaKnown RBP26.29■■□□□ 1.8
INPP4A-204ENST00000409540 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
INPP4A-204ENST00000409540 SYNJ1O43426 1573 aa26.19■■□□□ 1.78
INPP4A-204ENST00000409540 CFTRP13569 1480 aa26.14■■□□□ 1.78
INPP4A-204ENST00000409540 SOGA1O94964 1423 aa26.12■■□□□ 1.77
INPP4A-204ENST00000409540 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
INPP4A-204ENST00000409540 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
INPP4A-204ENST00000409540 PRKCSHP14314 528 aaPredicted RBP26.05■■□□□ 1.76
INPP4A-204ENST00000409540 RUSC2Q8N2Y8 1516 aa26.03■■□□□ 1.76
INPP4A-204ENST00000409540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
INPP4A-204ENST00000409540 ANP32EQ9BTT0 268 aa26.01■■□□□ 1.75
INPP4A-204ENST00000409540 TOP2BQ02880 1626 aa26■■□□□ 1.75
INPP4A-204ENST00000409540 PRDM2Q13029 1718 aa26■■□□□ 1.75
INPP4A-204ENST00000409540 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
INPP4A-204ENST00000409540 EEA1Q15075 1411 aa25.96■■□□□ 1.75
INPP4A-204ENST00000409540 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
INPP4A-204ENST00000409540 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
INPP4A-204ENST00000409540 CUX1P39880 1505 aa25.9■■□□□ 1.74
INPP4A-204ENST00000409540 CSRNP3Q8WYN3 585 aa25.9■■□□□ 1.74
INPP4A-204ENST00000409540 DNAJC5BQ9UF47 199 aa25.8■■□□□ 1.72
INPP4A-204ENST00000409540 NESP48681 1621 aa25.76■■□□□ 1.71
INPP4A-204ENST00000409540 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
INPP4A-204ENST00000409540 GOLGA3Q08378 1498 aa25.69■■□□□ 1.7
INPP4A-204ENST00000409540 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
INPP4A-204ENST00000409540 KIF21BO75037 1637 aa25.67■■□□□ 1.7
INPP4A-204ENST00000409540 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
INPP4A-204ENST00000409540 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
INPP4A-204ENST00000409540 TSHZ2Q9NRE2 1034 aa25.63■■□□□ 1.69
INPP4A-204ENST00000409540 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
INPP4A-204ENST00000409540 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
INPP4A-204ENST00000409540 MIER1Q8N108 512 aa25.6■■□□□ 1.69
INPP4A-204ENST00000409540 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
INPP4A-204ENST00000409540 FGD5Q6ZNL6 1462 aa25.56■■□□□ 1.68
INPP4A-204ENST00000409540 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
INPP4A-204ENST00000409540 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
INPP4A-204ENST00000409540 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
INPP4A-204ENST00000409540 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
INPP4A-204ENST00000409540 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
INPP4A-204ENST00000409540 PRXQ9BXM0 1461 aa25.48■■□□□ 1.67
INPP4A-204ENST00000409540 CUX2O14529 1486 aa25.46■■□□□ 1.67
INPP4A-204ENST00000409540 PDS5BQ9NTI5 1447 aa25.44■■□□□ 1.66
INPP4A-204ENST00000409540 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
INPP4A-204ENST00000409540 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
INPP4A-204ENST00000409540 KIF21AQ7Z4S6 1674 aa25.41■■□□□ 1.66
INPP4A-204ENST00000409540 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.66
INPP4A-204ENST00000409540 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
INPP4A-204ENST00000409540 IGF1RP08069 1367 aa25.34■■□□□ 1.65
INPP4A-204ENST00000409540 CLIP1P30622 1438 aa25.32■■□□□ 1.64
INPP4A-204ENST00000409540 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
INPP4A-204ENST00000409540 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms