RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
EDC3-209ENST00000566119 CCDC180Q9P1Z9 1646 aa45.03■■■■■ 4.8
EDC3-209ENST00000566119 ABCC9O60706 1549 aa44.68■■■■■ 4.74
EDC3-209ENST00000566119 RB1CC1Q8TDY2 1594 aa42.69■■■■■ 4.42
EDC3-209ENST00000566119 DCAF8L2P0C7V8 631 aa42.65■■■■■ 4.42
EDC3-209ENST00000566119 NACADO15069 1562 aa42.53■■■■■ 4.4
EDC3-209ENST00000566119 MYO15BQ96JP2 1530 aa42.14■■■■■ 4.34
EDC3-209ENST00000566119 ZCCHC6Q5VYS8 1495 aaKnown RBP42.02■■■■■ 4.32
EDC3-209ENST00000566119 DCAF1Q9Y4B6 1507 aa41.79■■■■■ 4.28
EDC3-209ENST00000566119 PABPN1Q86U42 306 aaKnown RBP eCLIP41.78■■■■■ 4.28
EDC3-209ENST00000566119 UNC13AQ9UPW8 1703 aa41.6■■■■■ 4.25
EDC3-209ENST00000566119 DNAJC5BQ9UF47 199 aa41.55■■■■■ 4.24
EDC3-209ENST00000566119 BICRAQ9NZM4 1560 aa41.43■■■■■ 4.22
EDC3-209ENST00000566119 SCRIBQ14160 1630 aa41.15■■■■■ 4.18
EDC3-209ENST00000566119 SHROOM4Q9ULL8 1493 aa40.9■■■■■ 4.14
EDC3-209ENST00000566119 EIF4G1Q04637 1599 aaKnown RBP40.37■■■■■ 4.05
EDC3-209ENST00000566119 CC2D2AQ9P2K1 1620 aa40.32■■■■■ 4.05
EDC3-209ENST00000566119 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
EDC3-209ENST00000566119 NCAPD3P42695 1498 aa39.33■■■■□ 3.89
EDC3-209ENST00000566119 SMARCA4P51532 1647 aa39.3■■■■□ 3.88
EDC3-209ENST00000566119 ATAD2BQ9ULI0 1458 aa39.28■■■■□ 3.88
EDC3-209ENST00000566119 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
EDC3-209ENST00000566119 SMARCA2P51531 1590 aa39.14■■■■□ 3.86
EDC3-209ENST00000566119 MROH2BQ7Z745 1585 aa39.01■■■■□ 3.84
EDC3-209ENST00000566119 HMGXB3Q12766 1538 aa39■■■■□ 3.83
EDC3-209ENST00000566119 PEG3Q9GZU2 1588 aa38.91■■■■□ 3.82
EDC3-209ENST00000566119 BAZ1BQ9UIG0 1483 aaKnown RBP38.91■■■■□ 3.82
EDC3-209ENST00000566119 NESP48681 1621 aa38.53■■■■□ 3.76
EDC3-209ENST00000566119 ERCC6Q03468 1493 aa38.52■■■■□ 3.76
EDC3-209ENST00000566119 WIZO95785 1651 aa38.52■■■■□ 3.76
EDC3-209ENST00000566119 RSF1Q96T23 1441 aaPredicted RBP38.44■■■■□ 3.74
EDC3-209ENST00000566119 LAMC3Q9Y6N6 1575 aa38.28■■■■□ 3.72
EDC3-209ENST00000566119 CUX2O14529 1486 aa38.23■■■■□ 3.71
EDC3-209ENST00000566119 CADPSQ9ULU8 1353 aa38.19■■■■□ 3.7
EDC3-209ENST00000566119 PDS5BQ9NTI5 1447 aa38.12■■■■□ 3.69
EDC3-209ENST00000566119 TOP2AP11388 1531 aaKnown RBP38.07■■■■□ 3.68
EDC3-209ENST00000566119 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
EDC3-209ENST00000566119 KIF21AQ7Z4S6 1674 aa37.92■■■■□ 3.66
EDC3-209ENST00000566119 CFTRP13569 1480 aa37.83■■■■□ 3.65
EDC3-209ENST00000566119 DNAJC5Q9H3Z4 198 aa37.73■■■■□ 3.63
EDC3-209ENST00000566119 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
EDC3-209ENST00000566119 FANCD2Q9BXW9 1451 aa37.71■■■■□ 3.63
EDC3-209ENST00000566119 MRC2Q9UBG0 1479 aa37.71■■■■□ 3.63
EDC3-209ENST00000566119 CEP164Q9UPV0 1460 aa37.67■■■■□ 3.62
EDC3-209ENST00000566119 WDR62O43379 1518 aa37.57■■■■□ 3.61
EDC3-209ENST00000566119 URB2Q14146 1524 aaKnown RBP37.36■■■■□ 3.57
EDC3-209ENST00000566119 PRDM2Q13029 1718 aa37.27■■■■□ 3.56
EDC3-209ENST00000566119 SUPT5HO00267 1087 aaKnown RBP37.24■■■■□ 3.55
EDC3-209ENST00000566119 TOPBP1Q92547 1522 aa37.05■■■■□ 3.52
EDC3-209ENST00000566119 ABCC8Q09428 1581 aa37■■■■□ 3.51
EDC3-209ENST00000566119 IFT140Q96RY7 1462 aa36.92■■■■□ 3.5
EDC3-209ENST00000566119 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
EDC3-209ENST00000566119 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
EDC3-209ENST00000566119 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
EDC3-209ENST00000566119 POLA1P09884 1462 aaPredicted RBP36.7■■■■□ 3.47
EDC3-209ENST00000566119 TARBP1Q13395 1621 aaKnown RBP36.63■■■■□ 3.45
EDC3-209ENST00000566119 SOGA1O94964 1423 aa36.61■■■■□ 3.45
EDC3-209ENST00000566119 AQRO60306 1485 aaKnown RBP eCLIP36.61■■■■□ 3.45
EDC3-209ENST00000566119 RAD54L2Q9Y4B4 1467 aa36.61■■■■□ 3.45
EDC3-209ENST00000566119 CUX1P39880 1505 aa36.6■■■■□ 3.45
EDC3-209ENST00000566119 EIF4G3O43432 1585 aaKnown RBP36.56■■■■□ 3.44
EDC3-209ENST00000566119 FGD5Q6ZNL6 1462 aa36.56■■■■□ 3.44
EDC3-209ENST00000566119 TDRD9Q8NDG6 1382 aaKnown RBP36.49■■■■□ 3.43
EDC3-209ENST00000566119 FBLN2P98095 1184 aa36.31■■■■□ 3.4
EDC3-209ENST00000566119 TRIM41Q8WV44 630 aa36.3■■■■□ 3.4
EDC3-209ENST00000566119 WDR97A6NE52 1622 aa36.25■■■■□ 3.39
EDC3-209ENST00000566119 WRNQ14191 1432 aaPredicted RBP eCLIP36.24■■■■□ 3.39
EDC3-209ENST00000566119 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
EDC3-209ENST00000566119 SNAPC4Q5SXM2 1469 aa36.18■■■■□ 3.38
EDC3-209ENST00000566119 ABCA10Q8WWZ4 1543 aa36.17■■■■□ 3.38
EDC3-209ENST00000566119 CHD1O14646 1710 aa36.14■■■■□ 3.38
EDC3-209ENST00000566119 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
EDC3-209ENST00000566119 TOP2BQ02880 1626 aa36.12■■■■□ 3.37
EDC3-209ENST00000566119 CHMP7Q8WUX9 453 aaPredicted RBP36.12■■■■□ 3.37
EDC3-209ENST00000566119 SYNJ1O43426 1573 aa36.11■■■■□ 3.37
EDC3-209ENST00000566119 MAGI1Q96QZ7 1491 aaPredicted RBP36.1■■■■□ 3.37
EDC3-209ENST00000566119 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
EDC3-209ENST00000566119 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.36
EDC3-209ENST00000566119 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.36
EDC3-209ENST00000566119 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.36
EDC3-209ENST00000566119 ABCA5Q8WWZ7 1642 aa36■■■■□ 3.35
EDC3-209ENST00000566119 ARHGEF11O15085 1522 aa35.99■■■■□ 3.35
EDC3-209ENST00000566119 SYNJ2O15056 1496 aa35.99■■■■□ 3.35
EDC3-209ENST00000566119 PBRM1Q86U86 1689 aa35.93■■■■□ 3.34
EDC3-209ENST00000566119 CYB5RLQ6IPT4 315 aa35.83■■■■□ 3.33
EDC3-209ENST00000566119 CLASP1Q7Z460 1538 aa35.81■■■■□ 3.32
EDC3-209ENST00000566119 FHAD1B1AJZ9 1412 aa35.71■■■■□ 3.31
EDC3-209ENST00000566119 GRIN2AQ12879 1464 aa35.7■■■■□ 3.31
EDC3-209ENST00000566119 ERICH3Q5RHP9 1530 aa35.7■■■■□ 3.31
EDC3-209ENST00000566119 ARAP1Q96P48 1450 aa35.69■■■■□ 3.3
EDC3-209ENST00000566119 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
EDC3-209ENST00000566119 NUP160Q12769 1436 aa35.57■■■■□ 3.28
EDC3-209ENST00000566119 CEP170Q5SW79 1584 aa35.52■■■■□ 3.28
EDC3-209ENST00000566119 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
EDC3-209ENST00000566119 IGF1RP08069 1367 aa35.5■■■■□ 3.27
EDC3-209ENST00000566119 ERCC6L2Q5T890 1561 aa35.34■■■■□ 3.25
EDC3-209ENST00000566119 JPH4Q96JJ6 628 aa35.32■■■■□ 3.24
EDC3-209ENST00000566119 SHROOM2Q13796 1616 aa35.28■■■■□ 3.24
EDC3-209ENST00000566119 TRHP20396 242 aaPredicted RBP35.25■■■■□ 3.23
EDC3-209ENST00000566119 CARMIL1Q5VZK9 1371 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 441.2 ms