Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.22□□□□□ -0.29
TCRAP04437 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 CYP2T1P-202ENST00000641596 2535 ntBASIC13.21□□□□□ -0.29
TCRAP04437 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TCRAP04437 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 AL391005.1-201ENST00000623953 2435 ntBASIC13.21□□□□□ -0.29
TCRAP04437 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 PCDHB17P-201ENST00000539533 2393 ntBASIC13.21□□□□□ -0.29
TCRAP04437 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TCRAP04437 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 INGX-201ENST00000359239 846 ntBASIC13.21□□□□□ -0.29
TCRAP04437 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TCRAP04437 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.21□□□□□ -0.29
TCRAP04437 AL158047.1-201ENST00000445918 881 ntBASIC13.21□□□□□ -0.29
TCRAP04437 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRAP04437 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TCRAP04437 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 MIR4785-201ENST00000585005 73 ntBASIC13.21□□□□□ -0.29
TCRAP04437 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.21□□□□□ -0.29
TCRAP04437 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRAP04437 AC004263.2-201ENST00000617183 678 ntBASIC13.21□□□□□ -0.29
TCRAP04437 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRAP04437 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TCRAP04437 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
TCRAP04437 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRAP04437 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRAP04437 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.21□□□□□ -0.3
TCRAP04437 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TCRAP04437 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TCRAP04437 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.21□□□□□ -0.3
TCRAP04437 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.21□□□□□ -0.3
TCRAP04437 KRT8P9-201ENST00000558927 1449 ntBASIC13.21□□□□□ -0.3
TCRAP04437 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.21□□□□□ -0.3
TCRAP04437 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TCRAP04437 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRAP04437 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.21□□□□□ -0.3
TCRAP04437 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 AC092068.3-201ENST00000587894 2016 ntBASIC13.2□□□□□ -0.3
TCRAP04437 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRAP04437 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRAP04437 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRAP04437 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms