Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.674e-6■□□□□ 9.3
LARP4Q71RC2 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.62□□□□□ -0.711e-7■□□□□ 9.3
LARP4Q71RC2 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-7■□□□□ 9.3
LARP4Q71RC2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC8.23□□□□□ -1.094e-6■□□□□ 9.3
LARP4Q71RC2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC7.44□□□□□ -1.221e-7■□□□□ 9.3
LARP4Q71RC2 TECR-209ENST00000596953 1043 ntTSL 220.08■□□□□ 0.814e-9■□□□□ 9.3
LARP4Q71RC2 TECR-202ENST00000593637 1043 ntTSL 320.08■□□□□ 0.814e-9■□□□□ 9.3
LARP4Q71RC2 TECR-204ENST00000594545 735 ntTSL 318.79■□□□□ 0.64e-9■□□□□ 9.3
LARP4Q71RC2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.034e-9■□□□□ 9.3
LARP4Q71RC2 TECR-210ENST00000597607 1164 ntTSL 314.88□□□□□ -0.034e-9■□□□□ 9.3
LARP4Q71RC2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.75□□□□□ -0.214e-9■□□□□ 9.3
LARP4Q71RC2 TECR-225ENST00000601652 551 ntTSL 413.65□□□□□ -0.224e-9■□□□□ 9.3
LARP4Q71RC2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.56□□□□□ -0.244e-9■□□□□ 9.3
LARP4Q71RC2 TECR-216ENST00000598987 1202 ntTSL 213.56□□□□□ -0.244e-9■□□□□ 9.3
LARP4Q71RC2 TECR-211ENST00000598298 868 ntTSL 512.27□□□□□ -0.454e-9■□□□□ 9.3
LARP4Q71RC2 TECR-205ENST00000594807 569 ntTSL 411.01□□□□□ -0.654e-9■□□□□ 9.3
LARP4Q71RC2 TECR-224ENST00000601461 828 ntTSL 310.03□□□□□ -0.84e-9■□□□□ 9.3
LARP4Q71RC2 TECR-219ENST00000600076 484 ntTSL 310.03□□□□□ -0.84e-9■□□□□ 9.3
LARP4Q71RC2 TECR-215ENST00000598918 314 ntTSL 39.77□□□□□ -0.854e-9■□□□□ 9.3
LARP4Q71RC2 TECR-212ENST00000598333 822 ntTSL 39.47□□□□□ -0.894e-9■□□□□ 9.3
LARP4Q71RC2 TECR-214ENST00000598715 541 ntTSL 59.31□□□□□ -0.924e-9■□□□□ 9.3
LARP4Q71RC2 TECR-208ENST00000596164 245 ntTSL 37.72□□□□□ -1.174e-9■□□□□ 9.3
LARP4Q71RC2 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.372e-10■□□□□ 9.3
LARP4Q71RC2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.083e-13■□□□□ 9.3
LARP4Q71RC2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.021e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.71□□□□□ -0.051e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.081e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-219ENST00000509409 1248 ntTSL 214.01□□□□□ -0.171e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC11.97□□□□□ -0.491e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC10.39□□□□□ -0.751e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-221ENST00000513769 539 ntTSL 39.64□□□□□ -0.871e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC9.39□□□□□ -0.911e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-213ENST00000368545 2147 ntTSL 1 (best)8.42□□□□□ -1.061e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.121e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-215ENST00000469717 4041 ntTSL 27.93□□□□□ -1.141e-8■□□□□ 9.3
LARP4Q71RC2 TPM3-203ENST00000312970 750 ntTSL 57.39□□□□□ -1.231e-8■□□□□ 9.3
LARP4Q71RC2 RNASET2-205ENST00000467705 524 ntTSL 59.66□□□□□ -0.865e-10■□□□□ 9.3
LARP4Q71RC2 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.291e-9■□□□□ 9.3
LARP4Q71RC2 TPR-206ENST00000481347 2727 ntTSL 510.42□□□□□ -0.741e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.841e-9■□□□□ 9.3
LARP4Q71RC2 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC9.25□□□□□ -0.931e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.011e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-205ENST00000558123 1934 ntTSL 58.48□□□□□ -1.051e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.171e-9■□□□□ 9.3
LARP4Q71RC2 C14orf37-203ENST00000554218 572 ntTSL 47.51□□□□□ -1.211e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.211e-9■□□□□ 9.3
LARP4Q71RC2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.291e-9■□□□□ 9.3
LARP4Q71RC2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.51e-6■□□□□ 9.3
LARP4Q71RC2 UBE2D2-204ENST00000505007 1170 ntTSL 317.48■□□□□ 0.391e-6■□□□□ 9.3
LARP4Q71RC2 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC9.68□□□□□ -0.861e-6■□□□□ 9.3
LARP4Q71RC2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.662e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.843e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.03■□□□□ 0.83e-8■□□□□ 9.3
LARP4Q71RC2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.87■□□□□ 0.612e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.483e-8■□□□□ 9.3
LARP4Q71RC2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.082e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-209ENST00000436782 1683 ntTSL 1 (best)14.83□□□□□ -0.043e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-207ENST00000423763 1792 ntTSL 214.29□□□□□ -0.123e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.352e-8■□□□□ 9.3
LARP4Q71RC2 SUMF2-211ENST00000438133 1771 ntTSL 1 (best)12.88□□□□□ -0.353e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-209ENST00000610454 606 ntTSL 312.28□□□□□ -0.442e-8■□□□□ 9.3
LARP4Q71RC2 RAE1-207ENST00000462438 3251 ntTSL 211.5□□□□□ -0.572e-8■□□□□ 9.3
LARP4Q71RC2 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.612e-8■□□□□ 9.3
LARP4Q71RC2 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.632e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-203ENST00000580231 901 ntTSL 38.94□□□□□ -0.982e-8■□□□□ 9.3
LARP4Q71RC2 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.012e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-205ENST00000581010 527 nt7.16□□□□□ -1.262e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-206ENST00000581093 493 ntTSL 55.9□□□□□ -1.462e-8■□□□□ 9.3
LARP4Q71RC2 SENP3-207ENST00000582789 536 ntTSL 25.64□□□□□ -1.512e-8■□□□□ 9.3
LARP4Q71RC2 APOC3-204ENST00000470144 269 ntTSL 511.91□□□□□ -0.56e-25■□□□□ 9.3
LARP4Q71RC2 APOC3-203ENST00000433777 359 ntTSL 58.99□□□□□ -0.976e-25■□□□□ 9.3
LARP4Q71RC2 MRPL17-203ENST00000532203 448 ntTSL 311.99□□□□□ -0.491e-6■□□□□ 9.3
LARP4Q71RC2 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 520.41■□□□□ 0.865e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-207ENST00000577663 2224 nt19.99■□□□□ 0.795e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-208ENST00000581590 1554 ntAPPRIS ALT2 TSL 519.93■□□□□ 0.785e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.575e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-206ENST00000482723 2317 ntTSL 216.95■□□□□ 0.35e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.56■□□□□ 0.085e-7■□□□□ 9.2
LARP4Q71RC2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.045e-7■□□□□ 9.2
LARP4Q71RC2 MT-TP-201ENST00000387461 68 ntBASIC5.63□□□□□ -1.512e-59■□□□□ 9.2
LARP4Q71RC2 STIP1-210ENST00000540887 877 ntTSL 214.4□□□□□ -0.15e-10■□□□□ 9.2
LARP4Q71RC2 STIP1-204ENST00000536973 738 ntTSL 512.62□□□□□ -0.395e-10■□□□□ 9.2
LARP4Q71RC2 MAN2A2-230ENST00000561448 1443 ntTSL 210.25□□□□□ -0.771e-10■□□□□ 9.2
LARP4Q71RC2 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.551e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.661e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-210ENST00000584343 747 ntTSL 59.74□□□□□ -0.851e-15■□□□□ 9.2
LARP4Q71RC2 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.181e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.49□□□□□ -1.211e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-203ENST00000578115 569 ntTSL 25.58□□□□□ -1.521e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-213ENST00000585176 353 ntTSL 35.05□□□□□ -1.61e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.71e-15■□□□□ 9.2
LARP4Q71RC2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.81e-15■□□□□ 9.2
LARP4Q71RC2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.23■■□□□ 1.316e-6■□□□□ 9.2
LARP4Q71RC2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.72■■□□□ 1.236e-6■□□□□ 9.2
LARP4Q71RC2 RALY-207ENST00000481580 773 ntTSL 221.37■■□□□ 1.011e-14■□□□□ 9.2
LARP4Q71RC2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.526e-6■□□□□ 9.2
LARP4Q71RC2 CD320-204ENST00000596246 492 ntTSL 317.25■□□□□ 0.359e-10■□□□□ 9.2
LARP4Q71RC2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.08■□□□□ 0.166e-6■□□□□ 9.2
LARP4Q71RC2 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.87□□□□□ -0.513e-11■□□□□ 9.2
LARP4Q71RC2 PTPMT1-204ENST00000527079 2272 ntTSL 1 (best)10.82□□□□□ -0.686e-6■□□□□ 9.2
Retrieved 100 of 15,922 protein–RNA pairs in 353.5 ms