RNA–Protein interactions for RNA: ENST00000470144.1

APOC3-204, Transcript of apolipoprotein C3, humanhuman

TSL 5

Gene APOC3, Length 269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-204ENST00000470144 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
APOC3-204ENST00000470144 ABCC9O60706 1549 aa29.68■■■□□ 2.34
APOC3-204ENST00000470144 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
APOC3-204ENST00000470144 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
APOC3-204ENST00000470144 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
APOC3-204ENST00000470144 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
APOC3-204ENST00000470144 NACADO15069 1562 aa27.94■■■□□ 2.06
APOC3-204ENST00000470144 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
APOC3-204ENST00000470144 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
APOC3-204ENST00000470144 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
APOC3-204ENST00000470144 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
APOC3-204ENST00000470144 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
APOC3-204ENST00000470144 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
APOC3-204ENST00000470144 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
APOC3-204ENST00000470144 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
APOC3-204ENST00000470144 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
APOC3-204ENST00000470144 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
APOC3-204ENST00000470144 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
APOC3-204ENST00000470144 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
APOC3-204ENST00000470144 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
APOC3-204ENST00000470144 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
APOC3-204ENST00000470144 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
APOC3-204ENST00000470144 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
APOC3-204ENST00000470144 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
APOC3-204ENST00000470144 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
APOC3-204ENST00000470144 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
APOC3-204ENST00000470144 CUX2O14529 1486 aa25.53■■□□□ 1.68
APOC3-204ENST00000470144 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
APOC3-204ENST00000470144 NESP48681 1621 aa25.49■■□□□ 1.67
APOC3-204ENST00000470144 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
APOC3-204ENST00000470144 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
APOC3-204ENST00000470144 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
APOC3-204ENST00000470144 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
APOC3-204ENST00000470144 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
APOC3-204ENST00000470144 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
APOC3-204ENST00000470144 WIZO95785 1651 aa25.05■■□□□ 1.6
APOC3-204ENST00000470144 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
APOC3-204ENST00000470144 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
APOC3-204ENST00000470144 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
APOC3-204ENST00000470144 WDR62O43379 1518 aa24.81■■□□□ 1.56
APOC3-204ENST00000470144 CFTRP13569 1480 aa24.79■■□□□ 1.56
APOC3-204ENST00000470144 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
APOC3-204ENST00000470144 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
APOC3-204ENST00000470144 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
APOC3-204ENST00000470144 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
APOC3-204ENST00000470144 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
APOC3-204ENST00000470144 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
APOC3-204ENST00000470144 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
APOC3-204ENST00000470144 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
APOC3-204ENST00000470144 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
APOC3-204ENST00000470144 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
APOC3-204ENST00000470144 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
APOC3-204ENST00000470144 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
APOC3-204ENST00000470144 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
APOC3-204ENST00000470144 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.451e-7■■■■□ 26.6
APOC3-204ENST00000470144 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
APOC3-204ENST00000470144 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
APOC3-204ENST00000470144 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
APOC3-204ENST00000470144 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 FBLN2P98095 1184 aa24.01■■□□□ 1.43
APOC3-204ENST00000470144 SOGA1O94964 1423 aa24.01■■□□□ 1.43
APOC3-204ENST00000470144 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
APOC3-204ENST00000470144 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
APOC3-204ENST00000470144 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
APOC3-204ENST00000470144 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
APOC3-204ENST00000470144 CUX1P39880 1505 aa23.89■■□□□ 1.41
APOC3-204ENST00000470144 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
APOC3-204ENST00000470144 CHD1O14646 1710 aa23.83■■□□□ 1.41
APOC3-204ENST00000470144 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
APOC3-204ENST00000470144 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
APOC3-204ENST00000470144 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
APOC3-204ENST00000470144 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
APOC3-204ENST00000470144 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
APOC3-204ENST00000470144 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
APOC3-204ENST00000470144 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
APOC3-204ENST00000470144 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
APOC3-204ENST00000470144 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
APOC3-204ENST00000470144 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
APOC3-204ENST00000470144 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
APOC3-204ENST00000470144 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
APOC3-204ENST00000470144 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
APOC3-204ENST00000470144 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
APOC3-204ENST00000470144 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
APOC3-204ENST00000470144 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
APOC3-204ENST00000470144 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
APOC3-204ENST00000470144 NUP160Q12769 1436 aa23.38■■□□□ 1.33
APOC3-204ENST00000470144 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
APOC3-204ENST00000470144 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
APOC3-204ENST00000470144 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
APOC3-204ENST00000470144 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
APOC3-204ENST00000470144 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
APOC3-204ENST00000470144 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
APOC3-204ENST00000470144 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
APOC3-204ENST00000470144 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
APOC3-204ENST00000470144 SHROOM2Q13796 1616 aa23.18■■□□□ 1.3
APOC3-204ENST00000470144 IGF1RP08069 1367 aa23.14■■□□□ 1.29
APOC3-204ENST00000470144 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms