RNA–Protein interactions for RNA: ENST00000470144.1

APOC3-204, Transcript of apolipoprotein C3, humanhuman

TSL 5

Gene APOC3, Length 269 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-204ENST00000470144 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
APOC3-204ENST00000470144 ABCC9O60706 1549 aa29.68■■■□□ 2.34
APOC3-204ENST00000470144 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
APOC3-204ENST00000470144 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
APOC3-204ENST00000470144 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
APOC3-204ENST00000470144 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
APOC3-204ENST00000470144 NACADO15069 1562 aa27.94■■■□□ 2.06
APOC3-204ENST00000470144 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
APOC3-204ENST00000470144 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
APOC3-204ENST00000470144 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
APOC3-204ENST00000470144 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
APOC3-204ENST00000470144 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
APOC3-204ENST00000470144 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
APOC3-204ENST00000470144 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
APOC3-204ENST00000470144 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
APOC3-204ENST00000470144 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
APOC3-204ENST00000470144 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
APOC3-204ENST00000470144 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
APOC3-204ENST00000470144 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
APOC3-204ENST00000470144 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
APOC3-204ENST00000470144 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
APOC3-204ENST00000470144 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
APOC3-204ENST00000470144 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
APOC3-204ENST00000470144 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
APOC3-204ENST00000470144 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
APOC3-204ENST00000470144 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
APOC3-204ENST00000470144 CUX2O14529 1486 aa25.53■■□□□ 1.68
APOC3-204ENST00000470144 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
APOC3-204ENST00000470144 NESP48681 1621 aa25.49■■□□□ 1.67
APOC3-204ENST00000470144 MROH2BQ7Z745 1585 aa25.43■■□□□ 1.66
APOC3-204ENST00000470144 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
APOC3-204ENST00000470144 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
APOC3-204ENST00000470144 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
APOC3-204ENST00000470144 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
APOC3-204ENST00000470144 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
APOC3-204ENST00000470144 WIZO95785 1651 aa25.05■■□□□ 1.6
APOC3-204ENST00000470144 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
APOC3-204ENST00000470144 RSF1Q96T23 1441 aaPredicted RBP24.94■■□□□ 1.58
APOC3-204ENST00000470144 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
APOC3-204ENST00000470144 WDR62O43379 1518 aa24.81■■□□□ 1.56
APOC3-204ENST00000470144 CFTRP13569 1480 aa24.79■■□□□ 1.56
APOC3-204ENST00000470144 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
APOC3-204ENST00000470144 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
APOC3-204ENST00000470144 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
APOC3-204ENST00000470144 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
APOC3-204ENST00000470144 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
APOC3-204ENST00000470144 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
APOC3-204ENST00000470144 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
APOC3-204ENST00000470144 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
APOC3-204ENST00000470144 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
APOC3-204ENST00000470144 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
APOC3-204ENST00000470144 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
APOC3-204ENST00000470144 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
APOC3-204ENST00000470144 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
APOC3-204ENST00000470144 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.451e-7■■■■□ 26.6
APOC3-204ENST00000470144 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
APOC3-204ENST00000470144 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
APOC3-204ENST00000470144 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
APOC3-204ENST00000470144 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
APOC3-204ENST00000470144 FBLN2P98095 1184 aa24.01■■□□□ 1.43
APOC3-204ENST00000470144 SOGA1O94964 1423 aa24.01■■□□□ 1.43
APOC3-204ENST00000470144 TDRD9Q8NDG6 1382 aaKnown RBP24■■□□□ 1.43
APOC3-204ENST00000470144 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
APOC3-204ENST00000470144 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
APOC3-204ENST00000470144 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
APOC3-204ENST00000470144 CUX1P39880 1505 aa23.89■■□□□ 1.41
APOC3-204ENST00000470144 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
APOC3-204ENST00000470144 CHD1O14646 1710 aa23.83■■□□□ 1.41
APOC3-204ENST00000470144 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
APOC3-204ENST00000470144 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
APOC3-204ENST00000470144 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
APOC3-204ENST00000470144 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
APOC3-204ENST00000470144 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
APOC3-204ENST00000470144 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
APOC3-204ENST00000470144 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
APOC3-204ENST00000470144 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
APOC3-204ENST00000470144 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
APOC3-204ENST00000470144 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
APOC3-204ENST00000470144 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
APOC3-204ENST00000470144 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
APOC3-204ENST00000470144 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
APOC3-204ENST00000470144 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
APOC3-204ENST00000470144 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
APOC3-204ENST00000470144 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
APOC3-204ENST00000470144 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
APOC3-204ENST00000470144 NUP160Q12769 1436 aa23.38■■□□□ 1.33
APOC3-204ENST00000470144 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
APOC3-204ENST00000470144 BIVM-ERCC5R4GMW8 1640 aa23.37■■□□□ 1.33
APOC3-204ENST00000470144 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
APOC3-204ENST00000470144 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
APOC3-204ENST00000470144 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
APOC3-204ENST00000470144 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
APOC3-204ENST00000470144 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
APOC3-204ENST00000470144 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
APOC3-204ENST00000470144 SHROOM2Q13796 1616 aa23.18■■□□□ 1.3
APOC3-204ENST00000470144 IGF1RP08069 1367 aa23.14■■□□□ 1.29
APOC3-204ENST00000470144 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms