RNA–Protein interactions for RNA: ENST00000260359.10

NUSAP1-201, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUSAP1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-201ENST00000260359 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
NUSAP1-201ENST00000260359 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
NUSAP1-201ENST00000260359 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
NUSAP1-201ENST00000260359 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
NUSAP1-201ENST00000260359 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.64
NUSAP1-201ENST00000260359 ABCC9O60706 1549 aa18.95■□□□□ 0.62
NUSAP1-201ENST00000260359 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
NUSAP1-201ENST00000260359 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
NUSAP1-201ENST00000260359 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
NUSAP1-201ENST00000260359 NACADO15069 1562 aa18.37■□□□□ 0.53
NUSAP1-201ENST00000260359 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
NUSAP1-201ENST00000260359 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
NUSAP1-201ENST00000260359 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.51
NUSAP1-201ENST00000260359 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.49
NUSAP1-201ENST00000260359 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUSAP1-201ENST00000260359 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
NUSAP1-201ENST00000260359 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
NUSAP1-201ENST00000260359 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
NUSAP1-201ENST00000260359 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
NUSAP1-201ENST00000260359 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
NUSAP1-201ENST00000260359 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
NUSAP1-201ENST00000260359 WIZO95785 1651 aa17.47■□□□□ 0.39
NUSAP1-201ENST00000260359 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
NUSAP1-201ENST00000260359 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
NUSAP1-201ENST00000260359 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
NUSAP1-201ENST00000260359 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
NUSAP1-201ENST00000260359 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
NUSAP1-201ENST00000260359 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
NUSAP1-201ENST00000260359 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
NUSAP1-201ENST00000260359 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
NUSAP1-201ENST00000260359 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
NUSAP1-201ENST00000260359 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
NUSAP1-201ENST00000260359 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
NUSAP1-201ENST00000260359 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
NUSAP1-201ENST00000260359 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
NUSAP1-201ENST00000260359 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
NUSAP1-201ENST00000260359 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
NUSAP1-201ENST00000260359 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
NUSAP1-201ENST00000260359 FAM9AQ8IZU1 332 aaPredicted RBP16.75■□□□□ 0.27
NUSAP1-201ENST00000260359 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
NUSAP1-201ENST00000260359 CFTRP13569 1480 aa16.64■□□□□ 0.25
NUSAP1-201ENST00000260359 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
NUSAP1-201ENST00000260359 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
NUSAP1-201ENST00000260359 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
NUSAP1-201ENST00000260359 NESP48681 1621 aa16.61■□□□□ 0.25
NUSAP1-201ENST00000260359 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
NUSAP1-201ENST00000260359 SOGA1O94964 1423 aa16.48■□□□□ 0.23
NUSAP1-201ENST00000260359 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
NUSAP1-201ENST00000260359 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
NUSAP1-201ENST00000260359 CUX1P39880 1505 aa16.44■□□□□ 0.22
NUSAP1-201ENST00000260359 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
NUSAP1-201ENST00000260359 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
NUSAP1-201ENST00000260359 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
NUSAP1-201ENST00000260359 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
NUSAP1-201ENST00000260359 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
NUSAP1-201ENST00000260359 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
NUSAP1-201ENST00000260359 CSRNP3Q8WYN3 585 aa16.33■□□□□ 0.2
NUSAP1-201ENST00000260359 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
NUSAP1-201ENST00000260359 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
NUSAP1-201ENST00000260359 TOPBP1Q92547 1522 aa16.27■□□□□ 0.19
NUSAP1-201ENST00000260359 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
NUSAP1-201ENST00000260359 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
NUSAP1-201ENST00000260359 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
NUSAP1-201ENST00000260359 EEA1Q15075 1411 aa16.23■□□□□ 0.19
NUSAP1-201ENST00000260359 UBTFP17480 764 aaKnown RBP16.23■□□□□ 0.19
NUSAP1-201ENST00000260359 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
NUSAP1-201ENST00000260359 CUX2O14529 1486 aa16.21■□□□□ 0.18
NUSAP1-201ENST00000260359 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
NUSAP1-201ENST00000260359 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
NUSAP1-201ENST00000260359 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
NUSAP1-201ENST00000260359 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
NUSAP1-201ENST00000260359 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
NUSAP1-201ENST00000260359 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
NUSAP1-201ENST00000260359 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
NUSAP1-201ENST00000260359 IGF1RP08069 1367 aa16.08■□□□□ 0.17
NUSAP1-201ENST00000260359 FOXD1Q16676 465 aa16.08■□□□□ 0.16
NUSAP1-201ENST00000260359 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
NUSAP1-201ENST00000260359 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
NUSAP1-201ENST00000260359 KIF21BO75037 1637 aa16.04■□□□□ 0.16
NUSAP1-201ENST00000260359 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
NUSAP1-201ENST00000260359 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
NUSAP1-201ENST00000260359 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
NUSAP1-201ENST00000260359 WDR62O43379 1518 aa16.01■□□□□ 0.15
NUSAP1-201ENST00000260359 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.152e-7■■■■■ 38.8
NUSAP1-201ENST00000260359 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
NUSAP1-201ENST00000260359 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
NUSAP1-201ENST00000260359 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
NUSAP1-201ENST00000260359 PPARGC1BQ86YN6 1023 aaKnown RBP15.97■□□□□ 0.15
NUSAP1-201ENST00000260359 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
NUSAP1-201ENST00000260359 WDR97A6NE52 1622 aa15.96■□□□□ 0.14
NUSAP1-201ENST00000260359 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
NUSAP1-201ENST00000260359 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
NUSAP1-201ENST00000260359 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
NUSAP1-201ENST00000260359 CLIP1P30622 1438 aa15.9■□□□□ 0.14
NUSAP1-201ENST00000260359 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
NUSAP1-201ENST00000260359 FBLN2P98095 1184 aa15.83■□□□□ 0.12
NUSAP1-201ENST00000260359 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
NUSAP1-201ENST00000260359 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
NUSAP1-201ENST00000260359 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
NUSAP1-201ENST00000260359 CUL7Q14999 1698 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms