RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
RAE1-207ENST00000462438 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
RAE1-207ENST00000462438 ZCCHC6Q5VYS8 1495 aaKnown RBP23.88■■□□□ 1.41
RAE1-207ENST00000462438 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
RAE1-207ENST00000462438 ABCC9O60706 1549 aa23.74■■□□□ 1.39
RAE1-207ENST00000462438 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
RAE1-207ENST00000462438 NACADO15069 1562 aa23.54■■□□□ 1.36
RAE1-207ENST00000462438 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
RAE1-207ENST00000462438 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
RAE1-207ENST00000462438 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
RAE1-207ENST00000462438 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
RAE1-207ENST00000462438 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
RAE1-207ENST00000462438 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
RAE1-207ENST00000462438 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
RAE1-207ENST00000462438 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
RAE1-207ENST00000462438 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
RAE1-207ENST00000462438 CECR2Q9BXF3 1484 aa21.94■■□□□ 1.1
RAE1-207ENST00000462438 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
RAE1-207ENST00000462438 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
RAE1-207ENST00000462438 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
RAE1-207ENST00000462438 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
RAE1-207ENST00000462438 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
RAE1-207ENST00000462438 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
RAE1-207ENST00000462438 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
RAE1-207ENST00000462438 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
RAE1-207ENST00000462438 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
RAE1-207ENST00000462438 WIZO95785 1651 aa21.64■■□□□ 1.06
RAE1-207ENST00000462438 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
RAE1-207ENST00000462438 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
RAE1-207ENST00000462438 SUPT5HO00267 1087 aaKnown RBP21.3■■□□□ 1
RAE1-207ENST00000462438 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
RAE1-207ENST00000462438 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
RAE1-207ENST00000462438 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
RAE1-207ENST00000462438 LAMC3Q9Y6N6 1575 aa21.03■□□□□ 0.96
RAE1-207ENST00000462438 CFTRP13569 1480 aa21.02■□□□□ 0.95
RAE1-207ENST00000462438 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
RAE1-207ENST00000462438 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
RAE1-207ENST00000462438 NESP48681 1621 aa20.72■□□□□ 0.91
RAE1-207ENST00000462438 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
RAE1-207ENST00000462438 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
RAE1-207ENST00000462438 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
RAE1-207ENST00000462438 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
RAE1-207ENST00000462438 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
RAE1-207ENST00000462438 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
RAE1-207ENST00000462438 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
RAE1-207ENST00000462438 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
RAE1-207ENST00000462438 THOC2Q8NI27 1593 aaKnown RBP20.53■□□□□ 0.88
RAE1-207ENST00000462438 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
RAE1-207ENST00000462438 WDR62O43379 1518 aa20.52■□□□□ 0.88
RAE1-207ENST00000462438 CUX1P39880 1505 aa20.5■□□□□ 0.87
RAE1-207ENST00000462438 SYNJ1O43426 1573 aa20.49■□□□□ 0.87
RAE1-207ENST00000462438 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
RAE1-207ENST00000462438 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
RAE1-207ENST00000462438 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
RAE1-207ENST00000462438 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
RAE1-207ENST00000462438 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
RAE1-207ENST00000462438 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
RAE1-207ENST00000462438 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
RAE1-207ENST00000462438 CUX2O14529 1486 aa20.28■□□□□ 0.84
RAE1-207ENST00000462438 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
RAE1-207ENST00000462438 ABCA10Q8WWZ4 1543 aa20.25■□□□□ 0.83
RAE1-207ENST00000462438 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
RAE1-207ENST00000462438 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
RAE1-207ENST00000462438 EEA1Q15075 1411 aa20.21■□□□□ 0.83
RAE1-207ENST00000462438 SOGA1O94964 1423 aa20.17■□□□□ 0.82
RAE1-207ENST00000462438 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
RAE1-207ENST00000462438 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
RAE1-207ENST00000462438 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
RAE1-207ENST00000462438 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
RAE1-207ENST00000462438 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
RAE1-207ENST00000462438 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
RAE1-207ENST00000462438 CUL7Q14999 1698 aa20.02■□□□□ 0.79
RAE1-207ENST00000462438 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
RAE1-207ENST00000462438 KIF21BO75037 1637 aa19.97■□□□□ 0.79
RAE1-207ENST00000462438 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
RAE1-207ENST00000462438 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
RAE1-207ENST00000462438 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
RAE1-207ENST00000462438 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
RAE1-207ENST00000462438 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
RAE1-207ENST00000462438 IGF1RP08069 1367 aa19.9■□□□□ 0.78
RAE1-207ENST00000462438 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
RAE1-207ENST00000462438 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
RAE1-207ENST00000462438 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■■■□ 22.7
RAE1-207ENST00000462438 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
RAE1-207ENST00000462438 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.77
RAE1-207ENST00000462438 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
RAE1-207ENST00000462438 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
RAE1-207ENST00000462438 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
RAE1-207ENST00000462438 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
RAE1-207ENST00000462438 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.76
RAE1-207ENST00000462438 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
RAE1-207ENST00000462438 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
RAE1-207ENST00000462438 CHD1O14646 1710 aa19.66■□□□□ 0.74
RAE1-207ENST00000462438 NUP160Q12769 1436 aa19.64■□□□□ 0.73
RAE1-207ENST00000462438 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
RAE1-207ENST00000462438 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
RAE1-207ENST00000462438 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
RAE1-207ENST00000462438 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
RAE1-207ENST00000462438 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
RAE1-207ENST00000462438 IQGAP2Q13576 1575 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms