RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.35
SENP3-203ENST00000580231 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
SENP3-203ENST00000580231 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
SENP3-203ENST00000580231 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
SENP3-203ENST00000580231 FOXD1Q16676 465 aa23.65■■□□□ 1.38
SENP3-203ENST00000580231 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
SENP3-203ENST00000580231 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
SENP3-203ENST00000580231 MSH5O43196 834 aa22.09■■□□□ 1.13
SENP3-203ENST00000580231 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
SENP3-203ENST00000580231 ADRA2BP18089 450 aa22.08■■□□□ 1.13
SENP3-203ENST00000580231 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
SENP3-203ENST00000580231 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.84
SENP3-203ENST00000580231 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
SENP3-203ENST00000580231 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
SENP3-203ENST00000580231 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
SENP3-203ENST00000580231 NISCHQ9Y2I1 1504 aa19.85■□□□□ 0.77
SENP3-203ENST00000580231 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
SENP3-203ENST00000580231 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
SENP3-203ENST00000580231 RNF216Q9NWF9 866 aaPredicted RBP19.28■□□□□ 0.68
SENP3-203ENST00000580231 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
SENP3-203ENST00000580231 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
SENP3-203ENST00000580231 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
SENP3-203ENST00000580231 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
SENP3-203ENST00000580231 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
SENP3-203ENST00000580231 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
SENP3-203ENST00000580231 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
SENP3-203ENST00000580231 KCNA4P22459 653 aa18.53■□□□□ 0.56
SENP3-203ENST00000580231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
SENP3-203ENST00000580231 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
SENP3-203ENST00000580231 SLC4A2P04920 1241 aa18■□□□□ 0.47
SENP3-203ENST00000580231 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
SENP3-203ENST00000580231 CAPN15O75808 1086 aa17.78■□□□□ 0.44
SENP3-203ENST00000580231 DSG3P32926 999 aa17.69■□□□□ 0.42
SENP3-203ENST00000580231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
SENP3-203ENST00000580231 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
SENP3-203ENST00000580231 APLP2Q06481 763 aa17.59■□□□□ 0.41
SENP3-203ENST00000580231 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
SENP3-203ENST00000580231 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
SENP3-203ENST00000580231 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
SENP3-203ENST00000580231 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
SENP3-203ENST00000580231 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
SENP3-203ENST00000580231 ABCB7O75027 752 aa17.38■□□□□ 0.37
SENP3-203ENST00000580231 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
SENP3-203ENST00000580231 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
SENP3-203ENST00000580231 POLA2Q14181 598 aa17.07■□□□□ 0.32
SENP3-203ENST00000580231 ZBTB22O15209 634 aa17.05■□□□□ 0.32
SENP3-203ENST00000580231 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
SENP3-203ENST00000580231 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
SENP3-203ENST00000580231 ABCC9O60706 1549 aa16.84■□□□□ 0.29
SENP3-203ENST00000580231 POTEHQ6S545 545 aa16.83■□□□□ 0.28
SENP3-203ENST00000580231 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
SENP3-203ENST00000580231 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
SENP3-203ENST00000580231 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
SENP3-203ENST00000580231 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
SENP3-203ENST00000580231 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
SENP3-203ENST00000580231 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
SENP3-203ENST00000580231 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
SENP3-203ENST00000580231 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
SENP3-203ENST00000580231 FBLN2P98095 1184 aa16.33■□□□□ 0.2
SENP3-203ENST00000580231 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
SENP3-203ENST00000580231 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
SENP3-203ENST00000580231 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
SENP3-203ENST00000580231 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
SENP3-203ENST00000580231 SPDYE2BA6NHP3 402 aa16.22■□□□□ 0.19
SENP3-203ENST00000580231 SPDYE6P0CI01 402 aa16.22■□□□□ 0.19
SENP3-203ENST00000580231 SPDYE2Q495Y8 402 aa16.22■□□□□ 0.19
SENP3-203ENST00000580231 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
SENP3-203ENST00000580231 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
SENP3-203ENST00000580231 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
SENP3-203ENST00000580231 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
SENP3-203ENST00000580231 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
SENP3-203ENST00000580231 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
SENP3-203ENST00000580231 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
SENP3-203ENST00000580231 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
SENP3-203ENST00000580231 NACADO15069 1562 aa16.01■□□□□ 0.15
SENP3-203ENST00000580231 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
SENP3-203ENST00000580231 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
SENP3-203ENST00000580231 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
SENP3-203ENST00000580231 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
SENP3-203ENST00000580231 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
SENP3-203ENST00000580231 HAX1O00165 279 aa15.78■□□□□ 0.12
SENP3-203ENST00000580231 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
SENP3-203ENST00000580231 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
SENP3-203ENST00000580231 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
SENP3-203ENST00000580231 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
SENP3-203ENST00000580231 EVX2Q03828 476 aa15.61■□□□□ 0.09
SENP3-203ENST00000580231 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
SENP3-203ENST00000580231 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
SENP3-203ENST00000580231 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
SENP3-203ENST00000580231 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
SENP3-203ENST00000580231 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
SENP3-203ENST00000580231 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
SENP3-203ENST00000580231 FARP1Q9Y4F1 1045 aaPredicted RBP15.36■□□□□ 0.05
SENP3-203ENST00000580231 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
SENP3-203ENST00000580231 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
SENP3-203ENST00000580231 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
SENP3-203ENST00000580231 CREBZFQ9NS37 354 aa15.27■□□□□ 0.04
SENP3-203ENST00000580231 GABBR2O75899 941 aa15.25■□□□□ 0.03
SENP3-203ENST00000580231 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
SENP3-203ENST00000580231 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms