RNA–Protein interactions for RNA: ENST00000481347.1

TPR-206, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 2,727 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-206ENST00000481347 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
TPR-206ENST00000481347 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
TPR-206ENST00000481347 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.99
TPR-206ENST00000481347 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
TPR-206ENST00000481347 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
TPR-206ENST00000481347 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
TPR-206ENST00000481347 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.65
TPR-206ENST00000481347 KCNA4P22459 653 aa18.72■□□□□ 0.59
TPR-206ENST00000481347 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
TPR-206ENST00000481347 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
TPR-206ENST00000481347 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
TPR-206ENST00000481347 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
TPR-206ENST00000481347 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
TPR-206ENST00000481347 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
TPR-206ENST00000481347 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
TPR-206ENST00000481347 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
TPR-206ENST00000481347 MYT1Q01538 1121 aa18.05■□□□□ 0.48
TPR-206ENST00000481347 ADRA2BP18089 450 aa18.03■□□□□ 0.48
TPR-206ENST00000481347 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
TPR-206ENST00000481347 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
TPR-206ENST00000481347 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
TPR-206ENST00000481347 PRKCSHP14314 528 aaPredicted RBP17.64■□□□□ 0.41
TPR-206ENST00000481347 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
TPR-206ENST00000481347 SCRIBQ14160 1630 aa17.52■□□□□ 0.39
TPR-206ENST00000481347 ABCC9O60706 1549 aa17.46■□□□□ 0.39
TPR-206ENST00000481347 ZBTB22O15209 634 aa17.44■□□□□ 0.38
TPR-206ENST00000481347 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
TPR-206ENST00000481347 NACADO15069 1562 aa17.31■□□□□ 0.36
TPR-206ENST00000481347 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
TPR-206ENST00000481347 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
TPR-206ENST00000481347 HRCP23327 699 aa17.27■□□□□ 0.36
TPR-206ENST00000481347 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
TPR-206ENST00000481347 LOC105371045A0A1W2PR82 267 aa17.12■□□□□ 0.33
TPR-206ENST00000481347 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
TPR-206ENST00000481347 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
TPR-206ENST00000481347 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
TPR-206ENST00000481347 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
TPR-206ENST00000481347 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
TPR-206ENST00000481347 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
TPR-206ENST00000481347 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
TPR-206ENST00000481347 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
TPR-206ENST00000481347 WIZO95785 1651 aa16.94■□□□□ 0.3
TPR-206ENST00000481347 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
TPR-206ENST00000481347 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
TPR-206ENST00000481347 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
TPR-206ENST00000481347 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
TPR-206ENST00000481347 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
TPR-206ENST00000481347 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
TPR-206ENST00000481347 UNC13AQ9UPW8 1703 aa16.78■□□□□ 0.28
TPR-206ENST00000481347 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
TPR-206ENST00000481347 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
TPR-206ENST00000481347 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
TPR-206ENST00000481347 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
TPR-206ENST00000481347 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
TPR-206ENST00000481347 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
TPR-206ENST00000481347 FKBP8Q14318 412 aa16.67■□□□□ 0.26
TPR-206ENST00000481347 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
TPR-206ENST00000481347 TULP1O00294 542 aaPredicted RBP16.64■□□□□ 0.25
TPR-206ENST00000481347 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
TPR-206ENST00000481347 ERICH6Q7L0X2 663 aa16.61■□□□□ 0.25
TPR-206ENST00000481347 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
TPR-206ENST00000481347 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
TPR-206ENST00000481347 SMARCA2P51531 1590 aa16.58■□□□□ 0.25
TPR-206ENST00000481347 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
TPR-206ENST00000481347 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
TPR-206ENST00000481347 APLP2Q06481 763 aa16.55■□□□□ 0.24
TPR-206ENST00000481347 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
TPR-206ENST00000481347 BCANQ96GW7 911 aa16.52■□□□□ 0.23
TPR-206ENST00000481347 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
TPR-206ENST00000481347 SOGA1O94964 1423 aa16.34■□□□□ 0.21
TPR-206ENST00000481347 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
TPR-206ENST00000481347 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
TPR-206ENST00000481347 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
TPR-206ENST00000481347 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
TPR-206ENST00000481347 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
TPR-206ENST00000481347 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.19
TPR-206ENST00000481347 EEA1Q15075 1411 aa16.26■□□□□ 0.19
TPR-206ENST00000481347 ARXQ96QS3 562 aa16.26■□□□□ 0.19
TPR-206ENST00000481347 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
TPR-206ENST00000481347 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
TPR-206ENST00000481347 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
TPR-206ENST00000481347 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
TPR-206ENST00000481347 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
TPR-206ENST00000481347 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
TPR-206ENST00000481347 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
TPR-206ENST00000481347 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
TPR-206ENST00000481347 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
TPR-206ENST00000481347 FBLN2P98095 1184 aa16.13■□□□□ 0.17
TPR-206ENST00000481347 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
TPR-206ENST00000481347 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
TPR-206ENST00000481347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
TPR-206ENST00000481347 FOXD1Q16676 465 aa16.05■□□□□ 0.16
TPR-206ENST00000481347 KIF21BO75037 1637 aa16.04■□□□□ 0.16
TPR-206ENST00000481347 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
TPR-206ENST00000481347 NCAPD3P42695 1498 aa16■□□□□ 0.15
TPR-206ENST00000481347 HMGXB3Q12766 1538 aa16■□□□□ 0.15
TPR-206ENST00000481347 TOP2BQ02880 1626 aa16■□□□□ 0.15
TPR-206ENST00000481347 ANP32EQ9BTT0 268 aa15.97■□□□□ 0.15
TPR-206ENST00000481347 CLIP1P30622 1438 aa15.96■□□□□ 0.15
TPR-206ENST00000481347 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms