RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
SENP3-205ENST00000581010 ABCC9O60706 1549 aa15.83■□□□□ 0.12
SENP3-205ENST00000581010 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
SENP3-205ENST00000581010 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
SENP3-205ENST00000581010 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
SENP3-205ENST00000581010 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
SENP3-205ENST00000581010 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
SENP3-205ENST00000581010 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
SENP3-205ENST00000581010 NACADO15069 1562 aa14.44□□□□□ -0.1
SENP3-205ENST00000581010 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
SENP3-205ENST00000581010 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
SENP3-205ENST00000581010 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
SENP3-205ENST00000581010 DCAF8L2P0C7V8 631 aa14.26□□□□□ -0.13
SENP3-205ENST00000581010 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
SENP3-205ENST00000581010 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
SENP3-205ENST00000581010 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
SENP3-205ENST00000581010 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
SENP3-205ENST00000581010 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
SENP3-205ENST00000581010 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
SENP3-205ENST00000581010 CUX2O14529 1486 aa13.83□□□□□ -0.2
SENP3-205ENST00000581010 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
SENP3-205ENST00000581010 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
SENP3-205ENST00000581010 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
SENP3-205ENST00000581010 NESP48681 1621 aa13.42□□□□□ -0.26
SENP3-205ENST00000581010 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
SENP3-205ENST00000581010 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
SENP3-205ENST00000581010 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
SENP3-205ENST00000581010 SUPT5HO00267 1087 aaKnown RBP13.22□□□□□ -0.29
SENP3-205ENST00000581010 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
SENP3-205ENST00000581010 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
SENP3-205ENST00000581010 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
SENP3-205ENST00000581010 LAMC3Q9Y6N6 1575 aa13.16□□□□□ -0.3
SENP3-205ENST00000581010 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
SENP3-205ENST00000581010 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
SENP3-205ENST00000581010 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
SENP3-205ENST00000581010 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
SENP3-205ENST00000581010 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
SENP3-205ENST00000581010 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
SENP3-205ENST00000581010 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
SENP3-205ENST00000581010 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
SENP3-205ENST00000581010 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
SENP3-205ENST00000581010 WDR62O43379 1518 aa13.04□□□□□ -0.32
SENP3-205ENST00000581010 WIZO95785 1651 aa13.04□□□□□ -0.32
SENP3-205ENST00000581010 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
SENP3-205ENST00000581010 AEBP2Q6ZN18 517 aaPredicted RBP13.01□□□□□ -0.33
SENP3-205ENST00000581010 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
SENP3-205ENST00000581010 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
SENP3-205ENST00000581010 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
SENP3-205ENST00000581010 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
SENP3-205ENST00000581010 CADPSQ9ULU8 1353 aa12.87□□□□□ -0.35
SENP3-205ENST00000581010 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
SENP3-205ENST00000581010 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
SENP3-205ENST00000581010 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
SENP3-205ENST00000581010 ARAP1Q96P48 1450 aa12.77□□□□□ -0.37
SENP3-205ENST00000581010 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
SENP3-205ENST00000581010 CHD1O14646 1710 aa12.73□□□□□ -0.37
SENP3-205ENST00000581010 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
SENP3-205ENST00000581010 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
SENP3-205ENST00000581010 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
SENP3-205ENST00000581010 CFTRP13569 1480 aa12.6□□□□□ -0.39
SENP3-205ENST00000581010 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
SENP3-205ENST00000581010 ILDR1Q86SU0 546 aaPredicted RBP12.59□□□□□ -0.39
SENP3-205ENST00000581010 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
SENP3-205ENST00000581010 FBLN2P98095 1184 aa12.52□□□□□ -0.41
SENP3-205ENST00000581010 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
SENP3-205ENST00000581010 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
SENP3-205ENST00000581010 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.41
SENP3-205ENST00000581010 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
SENP3-205ENST00000581010 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
SENP3-205ENST00000581010 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
SENP3-205ENST00000581010 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
SENP3-205ENST00000581010 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
SENP3-205ENST00000581010 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
SENP3-205ENST00000581010 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
SENP3-205ENST00000581010 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
SENP3-205ENST00000581010 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
SENP3-205ENST00000581010 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
SENP3-205ENST00000581010 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
SENP3-205ENST00000581010 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
SENP3-205ENST00000581010 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
SENP3-205ENST00000581010 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
SENP3-205ENST00000581010 ERCC6L2Q5T890 1561 aa12.28□□□□□ -0.44
SENP3-205ENST00000581010 CUX1P39880 1505 aa12.27□□□□□ -0.44
SENP3-205ENST00000581010 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
SENP3-205ENST00000581010 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
SENP3-205ENST00000581010 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
SENP3-205ENST00000581010 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
SENP3-205ENST00000581010 SYNJ2O15056 1496 aa12.22□□□□□ -0.45
SENP3-205ENST00000581010 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
SENP3-205ENST00000581010 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
SENP3-205ENST00000581010 SOGA1O94964 1423 aa12.2□□□□□ -0.46
SENP3-205ENST00000581010 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
SENP3-205ENST00000581010 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
SENP3-205ENST00000581010 EEA1Q15075 1411 aa12.18□□□□□ -0.46
SENP3-205ENST00000581010 KDM6BO15054 1643 aa12.18□□□□□ -0.46
SENP3-205ENST00000581010 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
SENP3-205ENST00000581010 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
SENP3-205ENST00000581010 HECW2Q9P2P5 1572 aa12.15□□□□□ -0.46
SENP3-205ENST00000581010 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
SENP3-205ENST00000581010 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms