RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
PTPMT1-204ENST00000527079 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
PTPMT1-204ENST00000527079 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
PTPMT1-204ENST00000527079 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
PTPMT1-204ENST00000527079 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
PTPMT1-204ENST00000527079 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
PTPMT1-204ENST00000527079 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
PTPMT1-204ENST00000527079 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
PTPMT1-204ENST00000527079 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PTPMT1-204ENST00000527079 ABCC9O60706 1549 aa18.14■□□□□ 0.49
PTPMT1-204ENST00000527079 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
PTPMT1-204ENST00000527079 NACADO15069 1562 aa18.02■□□□□ 0.47
PTPMT1-204ENST00000527079 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
PTPMT1-204ENST00000527079 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
PTPMT1-204ENST00000527079 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
PTPMT1-204ENST00000527079 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
PTPMT1-204ENST00000527079 LOC105371045A0A1W2PR82 267 aa17.58■□□□□ 0.4
PTPMT1-204ENST00000527079 HRCP23327 699 aa17.53■□□□□ 0.4
PTPMT1-204ENST00000527079 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
PTPMT1-204ENST00000527079 WIZO95785 1651 aa17.51■□□□□ 0.39
PTPMT1-204ENST00000527079 BAZ1AQ9NRL2 1556 aaPredicted RBP17.51■□□□□ 0.39
PTPMT1-204ENST00000527079 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
PTPMT1-204ENST00000527079 UNC13AQ9UPW8 1703 aa17.4■□□□□ 0.38
PTPMT1-204ENST00000527079 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
PTPMT1-204ENST00000527079 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
PTPMT1-204ENST00000527079 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
PTPMT1-204ENST00000527079 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
PTPMT1-204ENST00000527079 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
PTPMT1-204ENST00000527079 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
PTPMT1-204ENST00000527079 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
PTPMT1-204ENST00000527079 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
PTPMT1-204ENST00000527079 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
PTPMT1-204ENST00000527079 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
PTPMT1-204ENST00000527079 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPMT1-204ENST00000527079 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
PTPMT1-204ENST00000527079 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
PTPMT1-204ENST00000527079 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
PTPMT1-204ENST00000527079 EEA1Q15075 1411 aa16.95■□□□□ 0.3
PTPMT1-204ENST00000527079 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
PTPMT1-204ENST00000527079 SOGA1O94964 1423 aa16.86■□□□□ 0.29
PTPMT1-204ENST00000527079 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PTPMT1-204ENST00000527079 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
PTPMT1-204ENST00000527079 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
PTPMT1-204ENST00000527079 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
PTPMT1-204ENST00000527079 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
PTPMT1-204ENST00000527079 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
PTPMT1-204ENST00000527079 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
PTPMT1-204ENST00000527079 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
PTPMT1-204ENST00000527079 KIF21BO75037 1637 aa16.7■□□□□ 0.26
PTPMT1-204ENST00000527079 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
PTPMT1-204ENST00000527079 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
PTPMT1-204ENST00000527079 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
PTPMT1-204ENST00000527079 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
PTPMT1-204ENST00000527079 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
PTPMT1-204ENST00000527079 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
PTPMT1-204ENST00000527079 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
PTPMT1-204ENST00000527079 CLIP1P30622 1438 aa16.52■□□□□ 0.23
PTPMT1-204ENST00000527079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
PTPMT1-204ENST00000527079 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
PTPMT1-204ENST00000527079 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
PTPMT1-204ENST00000527079 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
PTPMT1-204ENST00000527079 CFTRP13569 1480 aa16.46■□□□□ 0.23
PTPMT1-204ENST00000527079 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
PTPMT1-204ENST00000527079 CUX1P39880 1505 aa16.42■□□□□ 0.22
PTPMT1-204ENST00000527079 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
PTPMT1-204ENST00000527079 PRDM2Q13029 1718 aa16.41■□□□□ 0.22
PTPMT1-204ENST00000527079 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
PTPMT1-204ENST00000527079 APLP2Q06481 763 aa16.35■□□□□ 0.21
PTPMT1-204ENST00000527079 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.19
PTPMT1-204ENST00000527079 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
PTPMT1-204ENST00000527079 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
PTPMT1-204ENST00000527079 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
PTPMT1-204ENST00000527079 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
PTPMT1-204ENST00000527079 CUX2O14529 1486 aa16.17■□□□□ 0.18
PTPMT1-204ENST00000527079 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
PTPMT1-204ENST00000527079 IGF1RP08069 1367 aa16.15■□□□□ 0.18
PTPMT1-204ENST00000527079 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
PTPMT1-204ENST00000527079 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
PTPMT1-204ENST00000527079 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
PTPMT1-204ENST00000527079 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
PTPMT1-204ENST00000527079 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
PTPMT1-204ENST00000527079 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
PTPMT1-204ENST00000527079 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
PTPMT1-204ENST00000527079 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
PTPMT1-204ENST00000527079 MAP3K1Q13233 1512 aa16.06■□□□□ 0.16
PTPMT1-204ENST00000527079 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
PTPMT1-204ENST00000527079 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
PTPMT1-204ENST00000527079 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
PTPMT1-204ENST00000527079 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
PTPMT1-204ENST00000527079 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
PTPMT1-204ENST00000527079 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
PTPMT1-204ENST00000527079 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
PTPMT1-204ENST00000527079 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
PTPMT1-204ENST00000527079 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
PTPMT1-204ENST00000527079 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
PTPMT1-204ENST00000527079 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.15
PTPMT1-204ENST00000527079 CUL7Q14999 1698 aa15.96■□□□□ 0.14
PTPMT1-204ENST00000527079 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
PTPMT1-204ENST00000527079 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PTPMT1-204ENST00000527079 NESP48681 1621 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms