RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 NISCHQ9Y2I1 1504 aa49.15■■■■■ 5.46
PTPMT1-202ENST00000326674 CCDC180Q9P1Z9 1646 aa43.97■■■■■ 4.63
PTPMT1-202ENST00000326674 ABCC9O60706 1549 aa43.37■■■■■ 4.53
PTPMT1-202ENST00000326674 RB1CC1Q8TDY2 1594 aa41.57■■■■■ 4.25
PTPMT1-202ENST00000326674 NACADO15069 1562 aa41.37■■■■■ 4.21
PTPMT1-202ENST00000326674 DCAF8L2P0C7V8 631 aa41.33■■■■■ 4.21
PTPMT1-202ENST00000326674 MYO15BQ96JP2 1530 aa40.91■■■■■ 4.14
PTPMT1-202ENST00000326674 ZCCHC6Q5VYS8 1495 aaKnown RBP40.86■■■■■ 4.13
PTPMT1-202ENST00000326674 UNC13AQ9UPW8 1703 aa40.7■■■■■ 4.11
PTPMT1-202ENST00000326674 DCAF1Q9Y4B6 1507 aa40.61■■■■■ 4.09
PTPMT1-202ENST00000326674 PABPN1Q86U42 306 aaKnown RBP eCLIP40.42■■■■■ 4.06
PTPMT1-202ENST00000326674 BICRAQ9NZM4 1560 aa40.25■■■■■ 4.03
PTPMT1-202ENST00000326674 SCRIBQ14160 1630 aa40.13■■■■■ 4.01
PTPMT1-202ENST00000326674 DNAJC5BQ9UF47 199 aa40.02■■■■■ 4
PTPMT1-202ENST00000326674 SHROOM4Q9ULL8 1493 aa39.77■■■■□ 3.96
PTPMT1-202ENST00000326674 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
PTPMT1-202ENST00000326674 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
PTPMT1-202ENST00000326674 CECR2Q9BXF3 1484 aa38.98■■■■□ 3.83
PTPMT1-202ENST00000326674 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
PTPMT1-202ENST00000326674 BAZ1AQ9NRL2 1556 aaPredicted RBP38.17■■■■□ 3.7
PTPMT1-202ENST00000326674 NCAPD3P42695 1498 aa38.1■■■■□ 3.69
PTPMT1-202ENST00000326674 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
PTPMT1-202ENST00000326674 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
PTPMT1-202ENST00000326674 HMGXB3Q12766 1538 aa37.96■■■■□ 3.67
PTPMT1-202ENST00000326674 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
PTPMT1-202ENST00000326674 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
PTPMT1-202ENST00000326674 PEG3Q9GZU2 1588 aa37.84■■■■□ 3.65
PTPMT1-202ENST00000326674 WIZO95785 1651 aa37.54■■■■□ 3.6
PTPMT1-202ENST00000326674 ERCC6Q03468 1493 aa37.46■■■■□ 3.59
PTPMT1-202ENST00000326674 NESP48681 1621 aa37.39■■■■□ 3.58
PTPMT1-202ENST00000326674 LAMC3Q9Y6N6 1575 aa37.27■■■■□ 3.56
PTPMT1-202ENST00000326674 RSF1Q96T23 1441 aaPredicted RBP37.27■■■■□ 3.56
PTPMT1-202ENST00000326674 CUX2O14529 1486 aa37.13■■■■□ 3.53
PTPMT1-202ENST00000326674 TOP2AP11388 1531 aaKnown RBP37.07■■■■□ 3.53
PTPMT1-202ENST00000326674 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
PTPMT1-202ENST00000326674 PDS5BQ9NTI5 1447 aa37■■■■□ 3.51
PTPMT1-202ENST00000326674 CADPSQ9ULU8 1353 aa36.99■■■■□ 3.51
PTPMT1-202ENST00000326674 THOC2Q8NI27 1593 aaKnown RBP36.94■■■■□ 3.5
PTPMT1-202ENST00000326674 CFTRP13569 1480 aa36.69■■■■□ 3.46
PTPMT1-202ENST00000326674 MRC2Q9UBG0 1479 aa36.66■■■■□ 3.46
PTPMT1-202ENST00000326674 CEP164Q9UPV0 1460 aa36.65■■■■□ 3.46
PTPMT1-202ENST00000326674 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
PTPMT1-202ENST00000326674 PRDM2Q13029 1718 aa36.6■■■■□ 3.45
PTPMT1-202ENST00000326674 CCDC88BA6NC98 1476 aa36.59■■■■□ 3.45
PTPMT1-202ENST00000326674 WDR62O43379 1518 aa36.54■■■■□ 3.44
PTPMT1-202ENST00000326674 DNAJC5Q9H3Z4 198 aa36.37■■■■□ 3.41
PTPMT1-202ENST00000326674 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
PTPMT1-202ENST00000326674 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
PTPMT1-202ENST00000326674 TOPBP1Q92547 1522 aa36■■■■□ 3.35
PTPMT1-202ENST00000326674 ABCC8Q09428 1581 aa35.97■■■■□ 3.35
PTPMT1-202ENST00000326674 DNMBPQ6XZF7 1577 aa35.95■■■■□ 3.35
PTPMT1-202ENST00000326674 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
PTPMT1-202ENST00000326674 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
PTPMT1-202ENST00000326674 EIF4G3O43432 1585 aaKnown RBP35.65■■■■□ 3.3
PTPMT1-202ENST00000326674 POLA1P09884 1462 aaPredicted RBP35.65■■■■□ 3.3
PTPMT1-202ENST00000326674 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
PTPMT1-202ENST00000326674 CUX1P39880 1505 aa35.57■■■■□ 3.29
PTPMT1-202ENST00000326674 FGD5Q6ZNL6 1462 aa35.54■■■■□ 3.28
PTPMT1-202ENST00000326674 RAD54L2Q9Y4B4 1467 aa35.52■■■■□ 3.28
PTPMT1-202ENST00000326674 SOGA1O94964 1423 aa35.5■■■■□ 3.27
PTPMT1-202ENST00000326674 OSCARQ8IYS5 282 aa35.5■■■■□ 3.27
PTPMT1-202ENST00000326674 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.278e-7■■■■□ 24
PTPMT1-202ENST00000326674 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
PTPMT1-202ENST00000326674 TDRD9Q8NDG6 1382 aaKnown RBP35.35■■■■□ 3.25
PTPMT1-202ENST00000326674 CHD1O14646 1710 aa35.35■■■■□ 3.25
PTPMT1-202ENST00000326674 BIVM-ERCC5R4GMW8 1640 aa35.23■■■■□ 3.23
PTPMT1-202ENST00000326674 FBLN2P98095 1184 aa35.21■■■■□ 3.23
PTPMT1-202ENST00000326674 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
PTPMT1-202ENST00000326674 TOP2BQ02880 1626 aa35.2■■■■□ 3.23
PTPMT1-202ENST00000326674 PBRM1Q86U86 1689 aa35.19■■■■□ 3.22
PTPMT1-202ENST00000326674 SNAPC4Q5SXM2 1469 aa35.18■■■■□ 3.22
PTPMT1-202ENST00000326674 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
PTPMT1-202ENST00000326674 TRIM41Q8WV44 630 aa35.16■■■■□ 3.22
PTPMT1-202ENST00000326674 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
PTPMT1-202ENST00000326674 ABCA10Q8WWZ4 1543 aa35.13■■■■□ 3.21
PTPMT1-202ENST00000326674 GAPVD1Q14C86 1478 aa35.1■■■■□ 3.21
PTPMT1-202ENST00000326674 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
PTPMT1-202ENST00000326674 ABCA5Q8WWZ7 1642 aa35.08■■■■□ 3.21
PTPMT1-202ENST00000326674 RIMBP3CA6NJZ7 1639 aa35.06■■■■□ 3.2
PTPMT1-202ENST00000326674 RIMBP3BA6NNM3 1639 aa35.06■■■■□ 3.2
PTPMT1-202ENST00000326674 RIMBP3Q9UFD9 1639 aa35.06■■■■□ 3.2
PTPMT1-202ENST00000326674 CHMP7Q8WUX9 453 aaPredicted RBP35.01■■■■□ 3.2
PTPMT1-202ENST00000326674 SYNJ2O15056 1496 aa34.97■■■■□ 3.19
PTPMT1-202ENST00000326674 ARHGEF11O15085 1522 aa34.96■■■■□ 3.19
PTPMT1-202ENST00000326674 CLASP1Q7Z460 1538 aa34.82■■■■□ 3.16
PTPMT1-202ENST00000326674 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
PTPMT1-202ENST00000326674 ERICH3Q5RHP9 1530 aa34.74■■■■□ 3.15
PTPMT1-202ENST00000326674 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
PTPMT1-202ENST00000326674 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
PTPMT1-202ENST00000326674 CYB5RLQ6IPT4 315 aa34.65■■■■□ 3.14
PTPMT1-202ENST00000326674 ARAP1Q96P48 1450 aa34.64■■■■□ 3.14
PTPMT1-202ENST00000326674 CEP170Q5SW79 1584 aa34.57■■■■□ 3.12
PTPMT1-202ENST00000326674 KIF27Q86VH2 1401 aa34.51■■■■□ 3.12
PTPMT1-202ENST00000326674 NUP160Q12769 1436 aa34.5■■■■□ 3.11
PTPMT1-202ENST00000326674 CUL7Q14999 1698 aa34.42■■■■□ 3.1
PTPMT1-202ENST00000326674 SHROOM2Q13796 1616 aa34.36■■■■□ 3.09
PTPMT1-202ENST00000326674 IGF1RP08069 1367 aa34.33■■■■□ 3.09
PTPMT1-202ENST00000326674 ERCC6L2Q5T890 1561 aa34.32■■■■□ 3.09
PTPMT1-202ENST00000326674 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
PTPMT1-202ENST00000326674 CARMIL1Q5VZK9 1371 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms