Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CHL1O00533 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
CHL1O00533 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.25■■□□□ 1.15
CHL1O00533 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 MIR4751-201ENST00000578027 74 ntBASIC22.25■■□□□ 1.15
CHL1O00533 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.25■■□□□ 1.15
CHL1O00533 AC023511.2-201ENST00000618803 211 ntBASIC22.25■■□□□ 1.15
CHL1O00533 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHL1O00533 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.25■■□□□ 1.15
CHL1O00533 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.24■■□□□ 1.15
CHL1O00533 AC087163.2-201ENST00000457299 853 ntBASIC22.24■■□□□ 1.15
CHL1O00533 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.24■■□□□ 1.15
CHL1O00533 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.24■■□□□ 1.15
CHL1O00533 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.24■■□□□ 1.15
CHL1O00533 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.24■■□□□ 1.15
CHL1O00533 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
CHL1O00533 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.24■■□□□ 1.15
CHL1O00533 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.24■■□□□ 1.15
CHL1O00533 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.24■■□□□ 1.15
CHL1O00533 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.24■■□□□ 1.15
CHL1O00533 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.24■■□□□ 1.15
CHL1O00533 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHL1O00533 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
CHL1O00533 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.23■■□□□ 1.15
CHL1O00533 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 COX10-202ENST00000429152 875 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.23■■□□□ 1.15
CHL1O00533 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHL1O00533 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHL1O00533 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.23■■□□□ 1.15
CHL1O00533 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CHL1O00533 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CHL1O00533 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CHL1O00533 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 RNA5SP416-201ENST00000516838 111 ntBASIC22.22■■□□□ 1.15
CHL1O00533 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.22■■□□□ 1.15
CHL1O00533 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.22■■□□□ 1.15
CHL1O00533 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.22■■□□□ 1.15
CHL1O00533 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHL1O00533 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CHL1O00533 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.21■■□□□ 1.15
CHL1O00533 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.21■■□□□ 1.15
CHL1O00533 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.21■■□□□ 1.15
CHL1O00533 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHL1O00533 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.21■■□□□ 1.15
CHL1O00533 RHOQP3-201ENST00000437982 621 ntBASIC22.21■■□□□ 1.15
CHL1O00533 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC22.21■■□□□ 1.15
CHL1O00533 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms