RNA–Protein interactions for RNA: ENST00000345957.8

SNX16-201, Transcript of sorting nexin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX16, Length 1,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-201ENST00000345957 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
SNX16-201ENST00000345957 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
SNX16-201ENST00000345957 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
SNX16-201ENST00000345957 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
SNX16-201ENST00000345957 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
SNX16-201ENST00000345957 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
SNX16-201ENST00000345957 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
SNX16-201ENST00000345957 ABCC9O60706 1549 aa31.22■■■□□ 2.59
SNX16-201ENST00000345957 NACADO15069 1562 aa30.91■■■□□ 2.54
SNX16-201ENST00000345957 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
SNX16-201ENST00000345957 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
SNX16-201ENST00000345957 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
SNX16-201ENST00000345957 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
SNX16-201ENST00000345957 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
SNX16-201ENST00000345957 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SNX16-201ENST00000345957 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
SNX16-201ENST00000345957 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
SNX16-201ENST00000345957 CHIC1Q5VXU3 224 aa29.62■■■□□ 2.33
SNX16-201ENST00000345957 BICRAQ9NZM4 1560 aa29.58■■■□□ 2.33
SNX16-201ENST00000345957 WIZO95785 1651 aa29.46■■■□□ 2.31
SNX16-201ENST00000345957 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
SNX16-201ENST00000345957 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
SNX16-201ENST00000345957 TOP2AP11388 1531 aaKnown RBP29.21■■■□□ 2.27
SNX16-201ENST00000345957 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
SNX16-201ENST00000345957 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
SNX16-201ENST00000345957 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
SNX16-201ENST00000345957 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
SNX16-201ENST00000345957 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
SNX16-201ENST00000345957 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
SNX16-201ENST00000345957 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
SNX16-201ENST00000345957 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
SNX16-201ENST00000345957 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
SNX16-201ENST00000345957 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
SNX16-201ENST00000345957 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
SNX16-201ENST00000345957 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
SNX16-201ENST00000345957 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
SNX16-201ENST00000345957 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
SNX16-201ENST00000345957 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
SNX16-201ENST00000345957 EEA1Q15075 1411 aa28.1■■■□□ 2.09
SNX16-201ENST00000345957 SYNJ1O43426 1573 aa28.06■■■□□ 2.08
SNX16-201ENST00000345957 CFTRP13569 1480 aa28.02■■■□□ 2.08
SNX16-201ENST00000345957 SOGA1O94964 1423 aa27.99■■■□□ 2.07
SNX16-201ENST00000345957 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
SNX16-201ENST00000345957 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
SNX16-201ENST00000345957 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
SNX16-201ENST00000345957 CSRNP3Q8WYN3 585 aa27.86■■■□□ 2.05
SNX16-201ENST00000345957 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
SNX16-201ENST00000345957 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
SNX16-201ENST00000345957 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
SNX16-201ENST00000345957 CUX1P39880 1505 aa27.74■■■□□ 2.03
SNX16-201ENST00000345957 GOLGA3Q08378 1498 aa27.71■■■□□ 2.03
SNX16-201ENST00000345957 TNIKQ9UKE5 1360 aa27.71■■■□□ 2.03
SNX16-201ENST00000345957 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
SNX16-201ENST00000345957 KIF21BO75037 1637 aa27.67■■■□□ 2.02
SNX16-201ENST00000345957 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
SNX16-201ENST00000345957 TRIM26Q12899 539 aaPredicted RBP27.61■■■□□ 2.01
SNX16-201ENST00000345957 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
SNX16-201ENST00000345957 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
SNX16-201ENST00000345957 FANCD2Q9BXW9 1451 aa27.53■■■□□ 2
SNX16-201ENST00000345957 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
SNX16-201ENST00000345957 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
SNX16-201ENST00000345957 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
SNX16-201ENST00000345957 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
SNX16-201ENST00000345957 PRXQ9BXM0 1461 aa27.4■■□□□ 1.98
SNX16-201ENST00000345957 NESP48681 1621 aa27.4■■□□□ 1.98
SNX16-201ENST00000345957 FGD5Q6ZNL6 1462 aa27.37■■□□□ 1.97
SNX16-201ENST00000345957 DNMBPQ6XZF7 1577 aa27.37■■□□□ 1.97
SNX16-201ENST00000345957 HRCP23327 699 aa27.31■■□□□ 1.96
SNX16-201ENST00000345957 CUX2O14529 1486 aa27.29■■□□□ 1.96
SNX16-201ENST00000345957 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
SNX16-201ENST00000345957 CLIP1P30622 1438 aa27.28■■□□□ 1.96
SNX16-201ENST00000345957 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
SNX16-201ENST00000345957 POLA1P09884 1462 aaPredicted RBP27.17■■□□□ 1.94
SNX16-201ENST00000345957 IGF1RP08069 1367 aa27.16■■□□□ 1.94
SNX16-201ENST00000345957 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
SNX16-201ENST00000345957 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
SNX16-201ENST00000345957 VPS8Q8N3P4 1428 aa27.11■■□□□ 1.93
SNX16-201ENST00000345957 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
SNX16-201ENST00000345957 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
SNX16-201ENST00000345957 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
SNX16-201ENST00000345957 CARMIL1Q5VZK9 1371 aa27.05■■□□□ 1.92
SNX16-201ENST00000345957 WDR97A6NE52 1622 aa27■■□□□ 1.91
SNX16-201ENST00000345957 CUL7Q14999 1698 aa26.94■■□□□ 1.9
SNX16-201ENST00000345957 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
SNX16-201ENST00000345957 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
SNX16-201ENST00000345957 MRC2Q9UBG0 1479 aa26.89■■□□□ 1.9
SNX16-201ENST00000345957 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
SNX16-201ENST00000345957 APLP2Q06481 763 aa26.87■■□□□ 1.89
SNX16-201ENST00000345957 ERCC6Q03468 1493 aa26.86■■□□□ 1.89
SNX16-201ENST00000345957 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
SNX16-201ENST00000345957 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
SNX16-201ENST00000345957 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
SNX16-201ENST00000345957 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
SNX16-201ENST00000345957 ZEB1P37275 1124 aaPredicted RBP26.79■■□□□ 1.88
SNX16-201ENST00000345957 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
SNX16-201ENST00000345957 WDR62O43379 1518 aa26.72■■□□□ 1.87
SNX16-201ENST00000345957 CTTNBP2Q8WZ74 1663 aa26.67■■□□□ 1.86
SNX16-201ENST00000345957 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
SNX16-201ENST00000345957 IFT140Q96RY7 1462 aa26.64■■□□□ 1.85
SNX16-201ENST00000345957 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms