RNA–Protein interactions for RNA: ENST00000361298.8

BEX3-201, Transcript of brain expressed X-linked 3, humanhuman

TSL 2 BASIC

Gene BEX3, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEX3-201ENST00000361298 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
BEX3-201ENST00000361298 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
BEX3-201ENST00000361298 ABCC9O60706 1549 aa37.26■■■■□ 3.56
BEX3-201ENST00000361298 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
BEX3-201ENST00000361298 NACADO15069 1562 aa35.51■■■■□ 3.27
BEX3-201ENST00000361298 DCAF8L2P0C7V8 631 aa35.37■■■■□ 3.25
BEX3-201ENST00000361298 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
BEX3-201ENST00000361298 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
BEX3-201ENST00000361298 DNAJC5BQ9UF47 199 aa34.88■■■■□ 3.17
BEX3-201ENST00000361298 UNC13AQ9UPW8 1703 aa34.82■■■■□ 3.16
BEX3-201ENST00000361298 DCAF1Q9Y4B6 1507 aa34.77■■■■□ 3.16
BEX3-201ENST00000361298 PABPN1Q86U42 306 aaKnown RBP eCLIP34.7■■■■□ 3.15
BEX3-201ENST00000361298 BICRAQ9NZM4 1560 aa34.52■■■■□ 3.12
BEX3-201ENST00000361298 SCRIBQ14160 1630 aa34.32■■■■□ 3.08
BEX3-201ENST00000361298 SHROOM4Q9ULL8 1493 aa34.22■■■■□ 3.07
BEX3-201ENST00000361298 EIF4G1Q04637 1599 aaKnown RBP33.7■■■□□ 2.99
BEX3-201ENST00000361298 CC2D2AQ9P2K1 1620 aa33.69■■■□□ 2.98
BEX3-201ENST00000361298 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
BEX3-201ENST00000361298 SMARCA4P51532 1647 aa32.76■■■□□ 2.83
BEX3-201ENST00000361298 NCAPD3P42695 1498 aa32.71■■■□□ 2.83
BEX3-201ENST00000361298 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
BEX3-201ENST00000361298 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
BEX3-201ENST00000361298 ATAD2BQ9ULI0 1458 aa32.67■■■□□ 2.82
BEX3-201ENST00000361298 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
BEX3-201ENST00000361298 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
BEX3-201ENST00000361298 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
BEX3-201ENST00000361298 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
BEX3-201ENST00000361298 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
BEX3-201ENST00000361298 DNAJC5Q9H3Z4 198 aa32.23■■■□□ 2.75
BEX3-201ENST00000361298 NESP48681 1621 aa32.07■■■□□ 2.72
BEX3-201ENST00000361298 CUX2O14529 1486 aa32.03■■■□□ 2.72
BEX3-201ENST00000361298 WIZO95785 1651 aa32.02■■■□□ 2.72
BEX3-201ENST00000361298 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
BEX3-201ENST00000361298 RSF1Q96T23 1441 aaPredicted RBP31.82■■■□□ 2.68
BEX3-201ENST00000361298 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
BEX3-201ENST00000361298 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
BEX3-201ENST00000361298 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
BEX3-201ENST00000361298 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
BEX3-201ENST00000361298 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.66
BEX3-201ENST00000361298 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
BEX3-201ENST00000361298 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
BEX3-201ENST00000361298 CFTRP13569 1480 aa31.45■■■□□ 2.62
BEX3-201ENST00000361298 FANCD2Q9BXW9 1451 aa31.41■■■□□ 2.62
BEX3-201ENST00000361298 WDR62O43379 1518 aa31.38■■■□□ 2.61
BEX3-201ENST00000361298 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
BEX3-201ENST00000361298 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
BEX3-201ENST00000361298 URB2Q14146 1524 aaKnown RBP31.1■■■□□ 2.57
BEX3-201ENST00000361298 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
BEX3-201ENST00000361298 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
BEX3-201ENST00000361298 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
BEX3-201ENST00000361298 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
BEX3-201ENST00000361298 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
BEX3-201ENST00000361298 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
BEX3-201ENST00000361298 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
BEX3-201ENST00000361298 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
BEX3-201ENST00000361298 EIF4G3O43432 1585 aaKnown RBP30.57■■■□□ 2.48
BEX3-201ENST00000361298 POLA1P09884 1462 aaPredicted RBP30.54■■■□□ 2.48
BEX3-201ENST00000361298 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
BEX3-201ENST00000361298 CUX1P39880 1505 aa30.42■■■□□ 2.46
BEX3-201ENST00000361298 SOGA1O94964 1423 aa30.42■■■□□ 2.46
BEX3-201ENST00000361298 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
BEX3-201ENST00000361298 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.46
BEX3-201ENST00000361298 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
BEX3-201ENST00000361298 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
BEX3-201ENST00000361298 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
BEX3-201ENST00000361298 CHD1O14646 1710 aa30.28■■■□□ 2.44
BEX3-201ENST00000361298 FBLN2P98095 1184 aa30.22■■■□□ 2.43
BEX3-201ENST00000361298 SNAPC4Q5SXM2 1469 aa30.18■■■□□ 2.42
BEX3-201ENST00000361298 RIMBP3CA6NJZ7 1639 aa30.17■■■□□ 2.42
BEX3-201ENST00000361298 RIMBP3BA6NNM3 1639 aa30.17■■■□□ 2.42
BEX3-201ENST00000361298 RIMBP3Q9UFD9 1639 aa30.17■■■□□ 2.42
BEX3-201ENST00000361298 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
BEX3-201ENST00000361298 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
BEX3-201ENST00000361298 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
BEX3-201ENST00000361298 ABCA10Q8WWZ4 1543 aa30.09■■■□□ 2.41
BEX3-201ENST00000361298 PBRM1Q86U86 1689 aa30.08■■■□□ 2.41
BEX3-201ENST00000361298 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
BEX3-201ENST00000361298 GAPVD1Q14C86 1478 aa30.07■■■□□ 2.4
BEX3-201ENST00000361298 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
BEX3-201ENST00000361298 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
BEX3-201ENST00000361298 CHMP7Q8WUX9 453 aaPredicted RBP30.05■■■□□ 2.4
BEX3-201ENST00000361298 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
BEX3-201ENST00000361298 SYNJ2O15056 1496 aa30■■■□□ 2.39
BEX3-201ENST00000361298 SYNJ1O43426 1573 aa30■■■□□ 2.39
BEX3-201ENST00000361298 CLASP1Q7Z460 1538 aa29.9■■■□□ 2.38
BEX3-201ENST00000361298 CYB5RLQ6IPT4 315 aa29.83■■■□□ 2.37
BEX3-201ENST00000361298 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
BEX3-201ENST00000361298 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
BEX3-201ENST00000361298 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
BEX3-201ENST00000361298 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
BEX3-201ENST00000361298 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
BEX3-201ENST00000361298 NUP160Q12769 1436 aa29.61■■■□□ 2.33
BEX3-201ENST00000361298 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
BEX3-201ENST00000361298 KIF27Q86VH2 1401 aa29.51■■■□□ 2.31
BEX3-201ENST00000361298 TRHP20396 242 aaPredicted RBP29.46■■■□□ 2.31
BEX3-201ENST00000361298 SHROOM2Q13796 1616 aa29.45■■■□□ 2.3
BEX3-201ENST00000361298 CUL7Q14999 1698 aa29.43■■■□□ 2.3
BEX3-201ENST00000361298 ERCC6L2Q5T890 1561 aa29.41■■■□□ 2.3
BEX3-201ENST00000361298 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
BEX3-201ENST00000361298 IGF1RP08069 1367 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms