Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)11.13□□□□□ -0.632e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-211ENST00000444559 577 ntTSL 411.09□□□□□ -0.632e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.81□□□□□ -0.682e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-240ENST00000637267 2677 ntTSL 510.53□□□□□ -0.722e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.39□□□□□ -0.752e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-203ENST00000409211 587 ntTSL 49.99□□□□□ -0.812e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.062e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-213ENST00000461784 751 ntTSL 36.02□□□□□ -1.452e-6■□□□□ 10.3
DROSHAQ9NRR4 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)5.97□□□□□ -1.452e-6■□□□□ 10.3
DROSHAQ9NRR4 ARHGEF40-204ENST00000555038 1796 ntTSL 1 (best)31.48■■■□□ 2.635e-7■□□□□ 10.3
DROSHAQ9NRR4 ARHGEF40-202ENST00000553709 5204 ntTSL 1 (best)19.34■□□□□ 0.695e-7■□□□□ 10.3
DROSHAQ9NRR4 ARHGEF40-207ENST00000556399 4902 ntTSL 1 (best)19.21■□□□□ 0.675e-7■□□□□ 10.3
DROSHAQ9NRR4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.645e-7■□□□□ 10.3
DROSHAQ9NRR4 ARHGEF40-206ENST00000555232 3902 ntTSL 215.99■□□□□ 0.155e-7■□□□□ 10.3
DROSHAQ9NRR4 YWHAQ-203ENST00000446619 665 ntTSL 331.99■■■□□ 2.711e-7■□□□□ 10.3
DROSHAQ9NRR4 HMGA1-206ENST00000478214 716 ntTSL 1 (best)23.86■■□□□ 1.419e-21■□□□□ 10.3
DROSHAQ9NRR4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.991e-7■□□□□ 10.3
DROSHAQ9NRR4 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.751e-7■□□□□ 10.3
DROSHAQ9NRR4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-7■□□□□ 10.3
DROSHAQ9NRR4 SMAD3-211ENST00000559460 568 ntTSL 416.08■□□□□ 0.161e-7■□□□□ 10.3
DROSHAQ9NRR4 FUS-209ENST00000566605 1787 ntTSL 1 (best)38.77■■■■□ 3.83e-8■□□□□ 10.2
DROSHAQ9NRR4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.563e-8■□□□□ 10.2
DROSHAQ9NRR4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.093e-8■□□□□ 10.2
DROSHAQ9NRR4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.423e-8■□□□□ 10.2
DROSHAQ9NRR4 FUS-206ENST00000487509 4920 ntTSL 216.92■□□□□ 0.33e-8■□□□□ 10.2
DROSHAQ9NRR4 PLXNB1-209ENST00000466353 626 ntTSL 328.66■■■□□ 2.183e-7■□□□□ 10.2
DROSHAQ9NRR4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.343e-7■□□□□ 10.2
DROSHAQ9NRR4 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)22.25■■□□□ 1.157e-8■□□□□ 10.2
DROSHAQ9NRR4 HBM-202ENST00000472539 592 ntTSL 531.88■■■□□ 2.695e-26■□□□□ 10.2
DROSHAQ9NRR4 TRAF4-211ENST00000478021 718 ntTSL 334.8■■■■□ 3.162e-7■□□□□ 10.2
DROSHAQ9NRR4 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC17.3■□□□□ 0.368e-7■□□□□ 10.2
DROSHAQ9NRR4 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)26.26■■□□□ 1.793e-8■□□□□ 10.2
DROSHAQ9NRR4 PLXNB2-209ENST00000479701 3504 ntTSL 218.31■□□□□ 0.523e-8■□□□□ 10.2
DROSHAQ9NRR4 PLXNB2-208ENST00000463165 3038 ntTSL 217.29■□□□□ 0.363e-8■□□□□ 10.2
DROSHAQ9NRR4 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC14.74□□□□□ -0.053e-8■□□□□ 10.2
DROSHAQ9NRR4 LINC-PINT-202ENST00000423414 616 ntTSL 435.13■■■■□ 3.214e-6■□□□□ 10.2
DROSHAQ9NRR4 LINC-PINT-204ENST00000431189 803 ntTSL 334.02■■■■□ 3.044e-6■□□□□ 10.2
DROSHAQ9NRR4 LINC-PINT-203ENST00000429901 565 ntTSL 431.39■■■□□ 2.624e-6■□□□□ 10.2
DROSHAQ9NRR4 LINC-PINT-205ENST00000433079 1262 ntTSL 1 (best)28.29■■■□□ 2.124e-6■□□□□ 10.2
DROSHAQ9NRR4 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC17.63■□□□□ 0.414e-6■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-205ENST00000586993 585 ntTSL 434.2■■■■□ 3.074e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-215ENST00000590696 563 ntTSL 434.14■■■■□ 3.064e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-207ENST00000588542 1297 ntTSL 331.04■■■□□ 2.564e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-204ENST00000586558 1127 ntTSL 229.39■■■□□ 2.294e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-212ENST00000590260 988 ntTSL 228.1■■■□□ 2.094e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-216ENST00000591275 484 ntTSL 225.54■■□□□ 1.684e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-211ENST00000590239 565 ntTSL 423.15■■□□□ 1.34e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-209ENST00000589318 1903 ntTSL 1 (best)23.14■■□□□ 1.294e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.144e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-218ENST00000592632 586 ntTSL 219.91■□□□□ 0.784e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-202ENST00000324340 1355 ntTSL 1 (best)19.4■□□□□ 0.74e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-210ENST00000589675 829 ntTSL 317.35■□□□□ 0.374e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-203ENST00000454233 922 ntTSL 3 BASIC16.36■□□□□ 0.214e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX39A-220ENST00000593008 538 ntTSL 314.69□□□□□ -0.064e-9■□□□□ 10.2
DROSHAQ9NRR4 ATXN2L-222ENST00000567024 525 ntTSL 326.83■■□□□ 1.886e-19■□□□□ 10.2
DROSHAQ9NRR4 TIMM44-208ENST00000598968 797 ntTSL 334.54■■■■□ 3.125e-9■□□□□ 10.2
DROSHAQ9NRR4 TIMM44-206ENST00000598481 587 ntTSL 226.5■■□□□ 1.835e-9■□□□□ 10.2
DROSHAQ9NRR4 TIMM44-202ENST00000595565 868 ntTSL 321.33■■□□□ 15e-9■□□□□ 10.2
DROSHAQ9NRR4 TIMM44-209ENST00000599650 921 ntTSL 220.85■□□□□ 0.935e-9■□□□□ 10.2
DROSHAQ9NRR4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC33.75■■■□□ 2.995e-11■□□□□ 10.2
DROSHAQ9NRR4 DDX42-212ENST00000581135 589 ntTSL 425.07■■□□□ 1.65e-11■□□□□ 10.2
DROSHAQ9NRR4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.545e-11■□□□□ 10.2
DROSHAQ9NRR4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.465e-11■□□□□ 10.2
DROSHAQ9NRR4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.225e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-210ENST00000567990 2855 ntTSL 521.07■□□□□ 0.965e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.425e-11■□□□□ 10.2
DROSHAQ9NRR4 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC11.17□□□□□ -0.625e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.675e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)8.69□□□□□ -1.025e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.045e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.075e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.255e-11■□□□□ 10.2
DROSHAQ9NRR4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.545e-11■□□□□ 10.2
DROSHAQ9NRR4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.84□□□□□ -1.795e-11■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-205ENST00000413202 422 ntTSL 1 (best)21.05■□□□□ 0.963e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-209ENST00000423846 457 ntTSL 1 (best)18.74■□□□□ 0.593e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-201ENST00000331944 529 ntTSL 1 (best)18.48■□□□□ 0.553e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC18.43■□□□□ 0.543e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-208ENST00000419680 675 ntTSL 5 BASIC16.9■□□□□ 0.33e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-210ENST00000437561 455 ntTSL 216.9■□□□□ 0.33e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-211ENST00000455131 733 ntTSL 5 BASIC16.9■□□□□ 0.33e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC11.77□□□□□ -0.533e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-214ENST00000629257 323 ntTSL 510.19□□□□□ -0.783e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.1□□□□□ -1.273e-6■□□□□ 10.2
DROSHAQ9NRR4 CYTOR-203ENST00000409139 519 ntTSL 34.77□□□□□ -1.653e-6■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.622e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-205ENST00000578574 958 ntTSL 236.82■■■■□ 3.492e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-220ENST00000584781 562 ntTSL 435.17■■■■□ 3.222e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-208ENST00000579572 863 ntTSL 330.79■■■□□ 2.522e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.432e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-219ENST00000584689 1033 ntTSL 229.18■■■□□ 2.262e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-206ENST00000578684 866 ntTSL 328.72■■■□□ 2.192e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-212ENST00000581642 557 ntTSL 428.02■■■□□ 2.082e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-217ENST00000583237 808 ntTSL 327.96■■■□□ 2.072e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-203ENST00000577650 545 ntTSL 327.82■■■□□ 2.042e-9■□□□□ 10.2
DROSHAQ9NRR4 SLC16A3-213ENST00000582715 279 ntTSL 524.25■■□□□ 1.472e-9■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.76■■□□□ 1.394e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-216ENST00000466021 823 ntTSL 223.69■■□□□ 1.384e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.264e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.224e-8■□□□□ 10.2
Retrieved 100 of 16,331 protein–RNA pairs in 79.1 ms