RNA–Protein interactions for RNA: ENST00000620105.4

C18orf54-206, Transcript of chromosome 18 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C18orf54, Length 5,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf54-206ENST00000620105 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
C18orf54-206ENST00000620105 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
C18orf54-206ENST00000620105 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
C18orf54-206ENST00000620105 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
C18orf54-206ENST00000620105 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
C18orf54-206ENST00000620105 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
C18orf54-206ENST00000620105 ABCC9O60706 1549 aa13.07□□□□□ -0.32
C18orf54-206ENST00000620105 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
C18orf54-206ENST00000620105 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
C18orf54-206ENST00000620105 CHIC1Q5VXU3 224 aa12.88□□□□□ -0.35
C18orf54-206ENST00000620105 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
C18orf54-206ENST00000620105 NACADO15069 1562 aa12.84□□□□□ -0.35
C18orf54-206ENST00000620105 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
C18orf54-206ENST00000620105 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
C18orf54-206ENST00000620105 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
C18orf54-206ENST00000620105 EIF4G1Q04637 1599 aaKnown RBP12.65□□□□□ -0.38
C18orf54-206ENST00000620105 MROH2BQ7Z745 1585 aa12.63□□□□□ -0.39
C18orf54-206ENST00000620105 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
C18orf54-206ENST00000620105 WIZO95785 1651 aa12.62□□□□□ -0.39
C18orf54-206ENST00000620105 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
C18orf54-206ENST00000620105 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
C18orf54-206ENST00000620105 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
C18orf54-206ENST00000620105 TOP2AP11388 1531 aaKnown RBP12.41□□□□□ -0.42
C18orf54-206ENST00000620105 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
C18orf54-206ENST00000620105 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
C18orf54-206ENST00000620105 HRCP23327 699 aa12.35□□□□□ -0.43
C18orf54-206ENST00000620105 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
C18orf54-206ENST00000620105 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
C18orf54-206ENST00000620105 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
C18orf54-206ENST00000620105 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
C18orf54-206ENST00000620105 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
C18orf54-206ENST00000620105 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
C18orf54-206ENST00000620105 PPARGC1BQ86YN6 1023 aaKnown RBP12.06□□□□□ -0.48
C18orf54-206ENST00000620105 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
C18orf54-206ENST00000620105 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
C18orf54-206ENST00000620105 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.48
C18orf54-206ENST00000620105 SOGA1O94964 1423 aa12.02□□□□□ -0.49
C18orf54-206ENST00000620105 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
C18orf54-206ENST00000620105 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
C18orf54-206ENST00000620105 BIVM-ERCC5R4GMW8 1640 aa11.98□□□□□ -0.49
C18orf54-206ENST00000620105 KIF21BO75037 1637 aa11.97□□□□□ -0.49
C18orf54-206ENST00000620105 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.5
C18orf54-206ENST00000620105 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
C18orf54-206ENST00000620105 EEA1Q15075 1411 aa11.93□□□□□ -0.5
C18orf54-206ENST00000620105 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
C18orf54-206ENST00000620105 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
C18orf54-206ENST00000620105 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
C18orf54-206ENST00000620105 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
C18orf54-206ENST00000620105 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
C18orf54-206ENST00000620105 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
C18orf54-206ENST00000620105 NCAPD3P42695 1498 aa11.84□□□□□ -0.51
C18orf54-206ENST00000620105 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
C18orf54-206ENST00000620105 CUX1P39880 1505 aa11.79□□□□□ -0.52
C18orf54-206ENST00000620105 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
C18orf54-206ENST00000620105 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
C18orf54-206ENST00000620105 RAPGEF2Q9Y4G8 1499 aa11.75□□□□□ -0.53
C18orf54-206ENST00000620105 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
C18orf54-206ENST00000620105 CFTRP13569 1480 aa11.74□□□□□ -0.53
C18orf54-206ENST00000620105 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
C18orf54-206ENST00000620105 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
C18orf54-206ENST00000620105 CLIP1P30622 1438 aa11.66□□□□□ -0.54
C18orf54-206ENST00000620105 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
C18orf54-206ENST00000620105 VPS8Q8N3P4 1428 aa11.66□□□□□ -0.54
C18orf54-206ENST00000620105 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
C18orf54-206ENST00000620105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
C18orf54-206ENST00000620105 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
C18orf54-206ENST00000620105 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
C18orf54-206ENST00000620105 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
C18orf54-206ENST00000620105 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
C18orf54-206ENST00000620105 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
C18orf54-206ENST00000620105 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
C18orf54-206ENST00000620105 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
C18orf54-206ENST00000620105 CUX2O14529 1486 aa11.48□□□□□ -0.57
C18orf54-206ENST00000620105 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
C18orf54-206ENST00000620105 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
C18orf54-206ENST00000620105 IGF1RP08069 1367 aa11.46□□□□□ -0.58
C18orf54-206ENST00000620105 CTTNBP2Q8WZ74 1663 aa11.45□□□□□ -0.58
C18orf54-206ENST00000620105 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
C18orf54-206ENST00000620105 LRRIQ1Q96JM4 1722 aa11.45□□□□□ -0.58
C18orf54-206ENST00000620105 CCER1Q8TC90 406 aaPredicted RBP11.44□□□□□ -0.58
C18orf54-206ENST00000620105 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
C18orf54-206ENST00000620105 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
C18orf54-206ENST00000620105 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
C18orf54-206ENST00000620105 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
C18orf54-206ENST00000620105 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
C18orf54-206ENST00000620105 CUL7Q14999 1698 aa11.41□□□□□ -0.58
C18orf54-206ENST00000620105 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
C18orf54-206ENST00000620105 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
C18orf54-206ENST00000620105 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
C18orf54-206ENST00000620105 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
C18orf54-206ENST00000620105 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
C18orf54-206ENST00000620105 NESP48681 1621 aa11.38□□□□□ -0.59
C18orf54-206ENST00000620105 KIF21AQ7Z4S6 1674 aa11.37□□□□□ -0.59
C18orf54-206ENST00000620105 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
C18orf54-206ENST00000620105 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
C18orf54-206ENST00000620105 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
C18orf54-206ENST00000620105 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
C18orf54-206ENST00000620105 DHX57Q6P158 1386 aaKnown RBP11.34□□□□□ -0.59
C18orf54-206ENST00000620105 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
C18orf54-206ENST00000620105 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms