Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.96□□□□□ -1.626e-7■□□□□ 10.2
NCBP2P52298 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.576e-7■□□□□ 10.2
NCBP2P52298 PUS10-206ENST00000602599 6366 ntTSL 1 (best)4.47□□□□□ -1.696e-7■□□□□ 10.2
NCBP2P52298 AFMID-209ENST00000589107 577 ntTSL 411.6□□□□□ -0.554e-20■□□□□ 10.2
NCBP2P52298 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC11.1□□□□□ -0.634e-20■□□□□ 10.2
NCBP2P52298 AFMID-205ENST00000586731 550 ntTSL 3 BASIC11.1□□□□□ -0.634e-20■□□□□ 10.2
NCBP2P52298 AFMID-215ENST00000592988 1605 ntTSL 29.38□□□□□ -0.914e-20■□□□□ 10.2
NCBP2P52298 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.56■□□□□ 0.49e-8■□□□□ 10.2
NCBP2P52298 SMG1P3-202ENST00000437413 589 ntTSL 420.36■□□□□ 0.856e-7■□□□□ 10.2
NCBP2P52298 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.41■□□□□ 0.066e-7■□□□□ 10.2
NCBP2P52298 MYBBP1A-203ENST00000570986 982 ntTSL 215.38■□□□□ 0.057e-9■□□□□ 10.2
NCBP2P52298 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.277e-9■□□□□ 10.2
NCBP2P52298 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.737e-9■□□□□ 10.2
NCBP2P52298 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.92e-9■□□□□ 10.2
NCBP2P52298 CTDSPL2-203ENST00000558791 591 ntTSL 49.39□□□□□ -0.912e-9■□□□□ 10.2
NCBP2P52298 CTDSPL2-210ENST00000560834 571 ntTSL 46.56□□□□□ -1.362e-9■□□□□ 10.2
NCBP2P52298 EPHA2-202ENST00000461614 875 ntTSL 222.84■■□□□ 1.256e-7■□□□□ 10.2
NCBP2P52298 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.256e-7■□□□□ 10.2
NCBP2P52298 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.97□□□□□ -0.333e-6■□□□□ 10.2
NCBP2P52298 LEMD1-211ENST00000629624 576 ntTSL 49.93□□□□□ -0.823e-6■□□□□ 10.2
NCBP2P52298 LEMD1-209ENST00000625854 516 ntTSL 47.98□□□□□ -1.133e-6■□□□□ 10.2
NCBP2P52298 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.12□□□□□ -1.273e-6■□□□□ 10.2
NCBP2P52298 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.48■■□□□ 1.034e-8■□□□□ 10.2
NCBP2P52298 LRRC1-203ENST00000487251 2527 ntTSL 221.44■■□□□ 1.024e-8■□□□□ 10.2
NCBP2P52298 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.534e-8■□□□□ 10.2
NCBP2P52298 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.66■■■□□ 2.55e-6■□□□□ 10.1
NCBP2P52298 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.39■■■□□ 2.465e-6■□□□□ 10.1
NCBP2P52298 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.886e-9■□□□□ 10.1
NCBP2P52298 PIP5K1A-206ENST00000424999 567 ntTSL 419.98■□□□□ 0.796e-9■□□□□ 10.1
NCBP2P52298 RPA1-202ENST00000570451 630 ntTSL 319.14■□□□□ 0.656e-9■□□□□ 10.1
NCBP2P52298 PRR5-210ENST00000459857 560 ntTSL 418.29■□□□□ 0.525e-6■□□□□ 10.1
NCBP2P52298 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.57■□□□□ 0.45e-6■□□□□ 10.1
NCBP2P52298 PRR5-213ENST00000492289 735 ntTSL 317.26■□□□□ 0.355e-6■□□□□ 10.1
NCBP2P52298 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.296e-9■□□□□ 10.1
NCBP2P52298 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.63■□□□□ 0.256e-9■□□□□ 10.1
NCBP2P52298 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.1■□□□□ 0.176e-9■□□□□ 10.1
NCBP2P52298 PRR5-206ENST00000432186 905 ntTSL 215.86■□□□□ 0.135e-6■□□□□ 10.1
NCBP2P52298 RPA1-203ENST00000571058 577 ntTSL 415.79■□□□□ 0.126e-9■□□□□ 10.1
NCBP2P52298 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.076e-9■□□□□ 10.1
NCBP2P52298 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.4■□□□□ 0.065e-6■□□□□ 10.1
NCBP2P52298 CHCHD3-202ENST00000423635 1310 ntTSL 1 (best)14.82□□□□□ -0.046e-9■□□□□ 10.1
NCBP2P52298 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.71□□□□□ -0.055e-6■□□□□ 10.1
NCBP2P52298 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.086e-9■□□□□ 10.1
NCBP2P52298 CHCHD3-204ENST00000457942 559 ntTSL 414.33□□□□□ -0.126e-9■□□□□ 10.1
NCBP2P52298 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.146e-9■□□□□ 10.1
NCBP2P52298 PRR5-214ENST00000492475 920 ntTSL 513.39□□□□□ -0.275e-6■□□□□ 10.1
NCBP2P52298 TRIM50-204ENST00000493498 555 ntTSL 412.42□□□□□ -0.426e-9■□□□□ 10.1
NCBP2P52298 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.496e-9■□□□□ 10.1
NCBP2P52298 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.01□□□□□ -0.496e-9■□□□□ 10.1
NCBP2P52298 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.01□□□□□ -0.496e-9■□□□□ 10.1
NCBP2P52298 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.566e-9■□□□□ 10.1
NCBP2P52298 REEP5-206ENST00000511865 1187 ntTSL 211.32□□□□□ -0.66e-9■□□□□ 10.1
NCBP2P52298 PIP5K1A-201ENST00000349792 3767 ntAPPRIS P3 TSL 1 (best)10.27□□□□□ -0.766e-9■□□□□ 10.1
NCBP2P52298 MED1-204ENST00000581334 580 ntTSL 39.96□□□□□ -0.824e-11■□□□□ 10.1
NCBP2P52298 MED1-203ENST00000577831 4584 ntTSL 28.83□□□□□ -14e-11■□□□□ 10.1
NCBP2P52298 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.026e-9■□□□□ 10.1
NCBP2P52298 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.19□□□□□ -1.14e-11■□□□□ 10.1
NCBP2P52298 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.354e-11■□□□□ 10.1
NCBP2P52298 PIP5K1A-208ENST00000447555 373 ntTSL 1 (best)6.07□□□□□ -1.446e-9■□□□□ 10.1
NCBP2P52298 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.766e-9■□□□□ 10.1
NCBP2P52298 MRPL42-209ENST00000552326 567 ntTSL 43.22□□□□□ -1.896e-9■□□□□ 10.1
NCBP2P52298 MRPL42-207ENST00000551396 725 ntTSL 52.92□□□□□ -1.946e-9■□□□□ 10.1
NCBP2P52298 MRPL42-201ENST00000358678 2105 ntTSL 1 (best)2.85□□□□□ -1.956e-9■□□□□ 10.1
NCBP2P52298 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.67□□□□□ -1.986e-9■□□□□ 10.1
NCBP2P52298 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.27□□□□□ -2.056e-9■□□□□ 10.1
NCBP2P52298 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.2□□□□□ -2.226e-9■□□□□ 10.1
NCBP2P52298 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.713e-8■□□□□ 10.1
NCBP2P52298 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.746e-8■□□□□ 10.1
NCBP2P52298 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.38■□□□□ 0.376e-8■□□□□ 10.1
NCBP2P52298 PCED1A-204ENST00000448755 1170 ntTSL 317.01■□□□□ 0.316e-8■□□□□ 10.1
NCBP2P52298 PCED1A-203ENST00000439542 1187 ntTSL 214.52□□□□□ -0.096e-8■□□□□ 10.1
NCBP2P52298 VPS36-203ENST00000475375 754 ntTSL 218.29■□□□□ 0.523e-6■□□□□ 10.1
NCBP2P52298 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.113e-6■□□□□ 10.1
NCBP2P52298 SUPT16H-203ENST00000555752 888 ntTSL 216.82■□□□□ 0.283e-19■□□□□ 10.1
NCBP2P52298 SUPT16H-205ENST00000556217 1027 ntTSL 213.85□□□□□ -0.193e-19■□□□□ 10.1
NCBP2P52298 SUPT16H-208ENST00000557652 877 ntTSL 513.16□□□□□ -0.33e-19■□□□□ 10.1
NCBP2P52298 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.113e-19■□□□□ 10.1
NCBP2P52298 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.1□□□□□ -1.273e-19■□□□□ 10.1
NCBP2P52298 SUPT16H-206ENST00000556309 582 ntTSL 31.99□□□□□ -2.093e-19■□□□□ 10.1
NCBP2P52298 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.36e-7■□□□□ 10.1
NCBP2P52298 TECPR2-207ENST00000561228 1028 ntTSL 222.83■■□□□ 1.256e-7■□□□□ 10.1
NCBP2P52298 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.36■■□□□ 1.016e-7■□□□□ 10.1
NCBP2P52298 MYEF2-212ENST00000561151 736 ntTSL 320.87■□□□□ 0.936e-7■□□□□ 10.1
NCBP2P52298 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.786e-7■□□□□ 10.1
NCBP2P52298 TOP3A-204ENST00000472959 913 ntTSL 319.3■□□□□ 0.686e-7■□□□□ 10.1
NCBP2P52298 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.22■□□□□ 0.676e-7■□□□□ 10.1
NCBP2P52298 TOP3A-218ENST00000584669 580 ntTSL 419.07■□□□□ 0.646e-7■□□□□ 10.1
NCBP2P52298 TOP3A-213ENST00000582230 588 ntTSL 418.67■□□□□ 0.586e-7■□□□□ 10.1
NCBP2P52298 TOP3A-219ENST00000584887 545 ntTSL 518.56■□□□□ 0.566e-7■□□□□ 10.1
NCBP2P52298 AC087289.5-201ENST00000586076 3175 ntBASIC18.27■□□□□ 0.516e-7■□□□□ 10.1
NCBP2P52298 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.516e-7■□□□□ 10.1
NCBP2P52298 FBXO17-203ENST00000596025 935 ntTSL 218.11■□□□□ 0.496e-7■□□□□ 10.1
NCBP2P52298 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.69■□□□□ 0.426e-7■□□□□ 10.1
NCBP2P52298 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)17.55■□□□□ 0.46e-7■□□□□ 10.1
NCBP2P52298 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.46e-7■□□□□ 10.1
NCBP2P52298 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.24■□□□□ 0.356e-7■□□□□ 10.1
NCBP2P52298 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.316e-7■□□□□ 10.1
NCBP2P52298 RABEP1-207ENST00000575991 551 ntTSL 416.98■□□□□ 0.316e-7■□□□□ 10.1
NCBP2P52298 C7orf49-211ENST00000487774 844 ntTSL 1 (best)16.69■□□□□ 0.266e-7■□□□□ 10.1
NCBP2P52298 RABEP1-206ENST00000575475 2768 ntTSL 1 (best)16.6■□□□□ 0.256e-7■□□□□ 10.1
Retrieved 100 of 18,329 protein–RNA pairs in 494.1 ms