RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 NISCHQ9Y2I1 1504 aa38.93■■■■□ 3.82
SUPT16H-205ENST00000556217 ABCC9O60706 1549 aa35.4■■■■□ 3.26
SUPT16H-205ENST00000556217 CCDC180Q9P1Z9 1646 aa35.08■■■■□ 3.21
SUPT16H-205ENST00000556217 DNAJC5BQ9UF47 199 aa33.86■■■■□ 3.01
SUPT16H-205ENST00000556217 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
SUPT16H-205ENST00000556217 NACADO15069 1562 aa33.19■■■□□ 2.9
SUPT16H-205ENST00000556217 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
SUPT16H-205ENST00000556217 PABPN1Q86U42 306 aaKnown RBP eCLIP32.88■■■□□ 2.85
SUPT16H-205ENST00000556217 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
SUPT16H-205ENST00000556217 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
SUPT16H-205ENST00000556217 BICRAQ9NZM4 1560 aa32.43■■■□□ 2.78
SUPT16H-205ENST00000556217 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
SUPT16H-205ENST00000556217 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
SUPT16H-205ENST00000556217 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
SUPT16H-205ENST00000556217 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
SUPT16H-205ENST00000556217 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
SUPT16H-205ENST00000556217 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
SUPT16H-205ENST00000556217 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
SUPT16H-205ENST00000556217 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
SUPT16H-205ENST00000556217 CUX2O14529 1486 aa30.83■■■□□ 2.53
SUPT16H-205ENST00000556217 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
SUPT16H-205ENST00000556217 NCAPD3P42695 1498 aa30.61■■■□□ 2.49
SUPT16H-205ENST00000556217 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
SUPT16H-205ENST00000556217 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
SUPT16H-205ENST00000556217 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
SUPT16H-205ENST00000556217 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
SUPT16H-205ENST00000556217 BAZ1AQ9NRL2 1556 aaPredicted RBP30.26■■■□□ 2.43
SUPT16H-205ENST00000556217 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
SUPT16H-205ENST00000556217 NESP48681 1621 aa30.18■■■□□ 2.42
SUPT16H-205ENST00000556217 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
SUPT16H-205ENST00000556217 THOC2Q8NI27 1593 aaKnown RBP29.99■■■□□ 2.39
SUPT16H-205ENST00000556217 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
SUPT16H-205ENST00000556217 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
SUPT16H-205ENST00000556217 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
SUPT16H-205ENST00000556217 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
SUPT16H-205ENST00000556217 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
SUPT16H-205ENST00000556217 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
SUPT16H-205ENST00000556217 WIZO95785 1651 aa29.62■■■□□ 2.33
SUPT16H-205ENST00000556217 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
SUPT16H-205ENST00000556217 WDR62O43379 1518 aa29.48■■■□□ 2.31
SUPT16H-205ENST00000556217 CEP164Q9UPV0 1460 aa29.41■■■□□ 2.3
SUPT16H-205ENST00000556217 OSCARQ8IYS5 282 aa29.38■■■□□ 2.29
SUPT16H-205ENST00000556217 FANCD2Q9BXW9 1451 aa29.34■■■□□ 2.29
SUPT16H-205ENST00000556217 CFTRP13569 1480 aa29.29■■■□□ 2.28
SUPT16H-205ENST00000556217 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
SUPT16H-205ENST00000556217 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
SUPT16H-205ENST00000556217 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.25
SUPT16H-205ENST00000556217 PRDM2Q13029 1718 aa29.06■■■□□ 2.24
SUPT16H-205ENST00000556217 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
SUPT16H-205ENST00000556217 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
SUPT16H-205ENST00000556217 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
SUPT16H-205ENST00000556217 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
SUPT16H-205ENST00000556217 IFT140Q96RY7 1462 aa28.83■■■□□ 2.21
SUPT16H-205ENST00000556217 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
SUPT16H-205ENST00000556217 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
SUPT16H-205ENST00000556217 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
SUPT16H-205ENST00000556217 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
SUPT16H-205ENST00000556217 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
SUPT16H-205ENST00000556217 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
SUPT16H-205ENST00000556217 TRHP20396 242 aaPredicted RBP28.65■■■□□ 2.18
SUPT16H-205ENST00000556217 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
SUPT16H-205ENST00000556217 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
SUPT16H-205ENST00000556217 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
SUPT16H-205ENST00000556217 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.157e-10■■■■■ 30.9
SUPT16H-205ENST00000556217 CHD1O14646 1710 aa28.46■■■□□ 2.15
SUPT16H-205ENST00000556217 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
SUPT16H-205ENST00000556217 FBLN2P98095 1184 aa28.41■■■□□ 2.14
SUPT16H-205ENST00000556217 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
SUPT16H-205ENST00000556217 SOGA1O94964 1423 aa28.32■■■□□ 2.12
SUPT16H-205ENST00000556217 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
SUPT16H-205ENST00000556217 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
SUPT16H-205ENST00000556217 TDRD9Q8NDG6 1382 aaKnown RBP28.26■■■□□ 2.12
SUPT16H-205ENST00000556217 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
SUPT16H-205ENST00000556217 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
SUPT16H-205ENST00000556217 CUX1P39880 1505 aa28.18■■■□□ 2.1
SUPT16H-205ENST00000556217 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
SUPT16H-205ENST00000556217 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
SUPT16H-205ENST00000556217 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
SUPT16H-205ENST00000556217 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
SUPT16H-205ENST00000556217 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
SUPT16H-205ENST00000556217 SYNJ2O15056 1496 aa28.05■■■□□ 2.08
SUPT16H-205ENST00000556217 PBRM1Q86U86 1689 aa28.01■■■□□ 2.07
SUPT16H-205ENST00000556217 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
SUPT16H-205ENST00000556217 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
SUPT16H-205ENST00000556217 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
SUPT16H-205ENST00000556217 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
SUPT16H-205ENST00000556217 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
SUPT16H-205ENST00000556217 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
SUPT16H-205ENST00000556217 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
SUPT16H-205ENST00000556217 TOP2BQ02880 1626 aa27.71■■■□□ 2.03
SUPT16H-205ENST00000556217 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
SUPT16H-205ENST00000556217 NUP160Q12769 1436 aa27.64■■■□□ 2.02
SUPT16H-205ENST00000556217 CEP170Q5SW79 1584 aa27.64■■■□□ 2.01
SUPT16H-205ENST00000556217 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
SUPT16H-205ENST00000556217 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
SUPT16H-205ENST00000556217 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
SUPT16H-205ENST00000556217 SHROOM2Q13796 1616 aa27.56■■■□□ 2
SUPT16H-205ENST00000556217 KIF13AQ9H1H9 1805 aa27.44■■□□□ 1.98
SUPT16H-205ENST00000556217 PRG4Q92954 1404 aaPredicted RBP27.4■■□□□ 1.98
SUPT16H-205ENST00000556217 JPH4Q96JJ6 628 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms