RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
CTDSPL2-201ENST00000260327 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
CTDSPL2-201ENST00000260327 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
CTDSPL2-201ENST00000260327 SHROOM4Q9ULL8 1493 aa15.81■□□□□ 0.12
CTDSPL2-201ENST00000260327 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
CTDSPL2-201ENST00000260327 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
CTDSPL2-201ENST00000260327 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
CTDSPL2-201ENST00000260327 MYT1Q01538 1121 aa15.23■□□□□ 0.03
CTDSPL2-201ENST00000260327 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
CTDSPL2-201ENST00000260327 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
CTDSPL2-201ENST00000260327 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
CTDSPL2-201ENST00000260327 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-201ENST00000260327 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
CTDSPL2-201ENST00000260327 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL2-201ENST00000260327 CCER1Q8TC90 406 aaPredicted RBP14.9□□□□□ -0.02
CTDSPL2-201ENST00000260327 APLP2Q06481 763 aa14.89□□□□□ -0.03
CTDSPL2-201ENST00000260327 HRCP23327 699 aa14.81□□□□□ -0.04
CTDSPL2-201ENST00000260327 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
CTDSPL2-201ENST00000260327 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
CTDSPL2-201ENST00000260327 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
CTDSPL2-201ENST00000260327 NEFLP07196 543 aa14.68□□□□□ -0.06
CTDSPL2-201ENST00000260327 TRIM26Q12899 539 aaPredicted RBP14.61□□□□□ -0.07
CTDSPL2-201ENST00000260327 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
CTDSPL2-201ENST00000260327 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
CTDSPL2-201ENST00000260327 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
CTDSPL2-201ENST00000260327 ATP1B4Q9UN42 357 aaPredicted RBP14.4□□□□□ -0.1
CTDSPL2-201ENST00000260327 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
CTDSPL2-201ENST00000260327 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.13
CTDSPL2-201ENST00000260327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
CTDSPL2-201ENST00000260327 DAXXQ9UER7 740 aaPredicted RBP14.24□□□□□ -0.13
CTDSPL2-201ENST00000260327 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.14
CTDSPL2-201ENST00000260327 RTL5Q5HYW3 569 aaPredicted RBP14.18□□□□□ -0.14
CTDSPL2-201ENST00000260327 ITGAEP38570 1179 aa14.17□□□□□ -0.14
CTDSPL2-201ENST00000260327 BCANQ96GW7 911 aa14.17□□□□□ -0.14
CTDSPL2-201ENST00000260327 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
CTDSPL2-201ENST00000260327 POLR3GLQ9BT43 218 aa14.05□□□□□ -0.16
CTDSPL2-201ENST00000260327 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
CTDSPL2-201ENST00000260327 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
CTDSPL2-201ENST00000260327 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
CTDSPL2-201ENST00000260327 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
CTDSPL2-201ENST00000260327 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
CTDSPL2-201ENST00000260327 CLSPNQ9HAW4 1339 aa13.84□□□□□ -0.19
CTDSPL2-201ENST00000260327 NEUROD1Q13562 356 aa13.77□□□□□ -0.21
CTDSPL2-201ENST00000260327 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
CTDSPL2-201ENST00000260327 ANP32CO43423 234 aa13.65□□□□□ -0.22
CTDSPL2-201ENST00000260327 FKBP8Q14318 412 aa13.65□□□□□ -0.22
CTDSPL2-201ENST00000260327 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
CTDSPL2-201ENST00000260327 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
CTDSPL2-201ENST00000260327 NBR1Q14596 966 aa13.61□□□□□ -0.23
CTDSPL2-201ENST00000260327 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
CTDSPL2-201ENST00000260327 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
CTDSPL2-201ENST00000260327 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
CTDSPL2-201ENST00000260327 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CTDSPL2-201ENST00000260327 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-201ENST00000260327 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTDSPL2-201ENST00000260327 GLIPR1L2Q4G1C9 344 aa13.49□□□□□ -0.25
CTDSPL2-201ENST00000260327 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
CTDSPL2-201ENST00000260327 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
CTDSPL2-201ENST00000260327 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
CTDSPL2-201ENST00000260327 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
CTDSPL2-201ENST00000260327 ABCC9O60706 1549 aa13.45□□□□□ -0.26
CTDSPL2-201ENST00000260327 MIER1Q8N108 512 aa13.43□□□□□ -0.26
CTDSPL2-201ENST00000260327 ARXQ96QS3 562 aa13.41□□□□□ -0.26
CTDSPL2-201ENST00000260327 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
CTDSPL2-201ENST00000260327 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
CTDSPL2-201ENST00000260327 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
CTDSPL2-201ENST00000260327 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL2-201ENST00000260327 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTDSPL2-201ENST00000260327 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
CTDSPL2-201ENST00000260327 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
CTDSPL2-201ENST00000260327 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
CTDSPL2-201ENST00000260327 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-201ENST00000260327 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
CTDSPL2-201ENST00000260327 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
CTDSPL2-201ENST00000260327 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
CTDSPL2-201ENST00000260327 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
CTDSPL2-201ENST00000260327 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
CTDSPL2-201ENST00000260327 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL2-201ENST00000260327 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
CTDSPL2-201ENST00000260327 CCDC180Q9P1Z9 1646 aa13.2□□□□□ -0.3
CTDSPL2-201ENST00000260327 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
CTDSPL2-201ENST00000260327 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
CTDSPL2-201ENST00000260327 ZNF777Q9ULD5 760 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL2-201ENST00000260327 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
CTDSPL2-201ENST00000260327 FBLN2P98095 1184 aa13.12□□□□□ -0.31
CTDSPL2-201ENST00000260327 NEFMP07197 916 aa13.1□□□□□ -0.31
CTDSPL2-201ENST00000260327 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
CTDSPL2-201ENST00000260327 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-201ENST00000260327 MRS2Q9HD23 443 aa13.08□□□□□ -0.31
CTDSPL2-201ENST00000260327 DEKP35659 375 aaKnown RBP13.07□□□□□ -0.32
CTDSPL2-201ENST00000260327 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
CTDSPL2-201ENST00000260327 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
CTDSPL2-201ENST00000260327 CLIP1P30622 1438 aa13.05□□□□□ -0.32
CTDSPL2-201ENST00000260327 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
CTDSPL2-201ENST00000260327 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL2-201ENST00000260327 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
CTDSPL2-201ENST00000260327 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.32
CTDSPL2-201ENST00000260327 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL2-201ENST00000260327 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL2-201ENST00000260327 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms