RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
SUPT16H-206ENST00000556309 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
SUPT16H-206ENST00000556309 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
SUPT16H-206ENST00000556309 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
SUPT16H-206ENST00000556309 FOXD1Q16676 465 aa18.57■□□□□ 0.56
SUPT16H-206ENST00000556309 MSH5O43196 834 aa17.74■□□□□ 0.43
SUPT16H-206ENST00000556309 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
SUPT16H-206ENST00000556309 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
SUPT16H-206ENST00000556309 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
SUPT16H-206ENST00000556309 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
SUPT16H-206ENST00000556309 ADRA2BP18089 450 aa16.98■□□□□ 0.31
SUPT16H-206ENST00000556309 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
SUPT16H-206ENST00000556309 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
SUPT16H-206ENST00000556309 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
SUPT16H-206ENST00000556309 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-206ENST00000556309 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SUPT16H-206ENST00000556309 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
SUPT16H-206ENST00000556309 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
SUPT16H-206ENST00000556309 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
SUPT16H-206ENST00000556309 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
SUPT16H-206ENST00000556309 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
SUPT16H-206ENST00000556309 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
SUPT16H-206ENST00000556309 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
SUPT16H-206ENST00000556309 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
SUPT16H-206ENST00000556309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.12e-9■■■□□ 18.7
SUPT16H-206ENST00000556309 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-206ENST00000556309 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
SUPT16H-206ENST00000556309 APLP2Q06481 763 aa13.93□□□□□ -0.18
SUPT16H-206ENST00000556309 CAPN15O75808 1086 aa13.91□□□□□ -0.18
SUPT16H-206ENST00000556309 DSG3P32926 999 aa13.9□□□□□ -0.18
SUPT16H-206ENST00000556309 POTEHQ6S545 545 aa13.8□□□□□ -0.2
SUPT16H-206ENST00000556309 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
SUPT16H-206ENST00000556309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
SUPT16H-206ENST00000556309 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
SUPT16H-206ENST00000556309 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
SUPT16H-206ENST00000556309 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
SUPT16H-206ENST00000556309 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
SUPT16H-206ENST00000556309 KCNA4P22459 653 aa13.61□□□□□ -0.23
SUPT16H-206ENST00000556309 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
SUPT16H-206ENST00000556309 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
SUPT16H-206ENST00000556309 ABCB7O75027 752 aa13.44□□□□□ -0.26
SUPT16H-206ENST00000556309 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
SUPT16H-206ENST00000556309 POLA2Q14181 598 aa13.16□□□□□ -0.3
SUPT16H-206ENST00000556309 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
SUPT16H-206ENST00000556309 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-206ENST00000556309 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
SUPT16H-206ENST00000556309 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
SUPT16H-206ENST00000556309 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
SUPT16H-206ENST00000556309 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
SUPT16H-206ENST00000556309 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SUPT16H-206ENST00000556309 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-206ENST00000556309 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
SUPT16H-206ENST00000556309 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
SUPT16H-206ENST00000556309 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
SUPT16H-206ENST00000556309 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.395e-13■■■□□ 14.8
SUPT16H-206ENST00000556309 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
SUPT16H-206ENST00000556309 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
SUPT16H-206ENST00000556309 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
SUPT16H-206ENST00000556309 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
SUPT16H-206ENST00000556309 HAX1O00165 279 aa12.59□□□□□ -0.39
SUPT16H-206ENST00000556309 FBLN2P98095 1184 aa12.59□□□□□ -0.39
SUPT16H-206ENST00000556309 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
SUPT16H-206ENST00000556309 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
SUPT16H-206ENST00000556309 ZBTB22O15209 634 aa12.43□□□□□ -0.42
SUPT16H-206ENST00000556309 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
SUPT16H-206ENST00000556309 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
SUPT16H-206ENST00000556309 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
SUPT16H-206ENST00000556309 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
SUPT16H-206ENST00000556309 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
SUPT16H-206ENST00000556309 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
SUPT16H-206ENST00000556309 EVX2Q03828 476 aa12.21□□□□□ -0.45
SUPT16H-206ENST00000556309 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
SUPT16H-206ENST00000556309 CLCN6P51797 869 aa12.16□□□□□ -0.46
SUPT16H-206ENST00000556309 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
SUPT16H-206ENST00000556309 GABBR2O75899 941 aa12.09□□□□□ -0.47
SUPT16H-206ENST00000556309 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
SUPT16H-206ENST00000556309 LHX8Q68G74 356 aa12□□□□□ -0.49
SUPT16H-206ENST00000556309 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
SUPT16H-206ENST00000556309 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
SUPT16H-206ENST00000556309 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
SUPT16H-206ENST00000556309 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
SUPT16H-206ENST00000556309 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
SUPT16H-206ENST00000556309 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
SUPT16H-206ENST00000556309 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
SUPT16H-206ENST00000556309 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-206ENST00000556309 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
SUPT16H-206ENST00000556309 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
SUPT16H-206ENST00000556309 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
SUPT16H-206ENST00000556309 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
SUPT16H-206ENST00000556309 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
SUPT16H-206ENST00000556309 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
SUPT16H-206ENST00000556309 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
SUPT16H-206ENST00000556309 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-206ENST00000556309 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
SUPT16H-206ENST00000556309 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
SUPT16H-206ENST00000556309 C7P10643 843 aa11.4□□□□□ -0.58
SUPT16H-206ENST00000556309 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
SUPT16H-206ENST00000556309 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
SUPT16H-206ENST00000556309 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
SUPT16H-206ENST00000556309 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms