RNA–Protein interactions for RNA: ENST00000625854.1

LEMD1-209, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-209ENST00000625854 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
LEMD1-209ENST00000625854 ABCC9O60706 1549 aa19.8■□□□□ 0.76
LEMD1-209ENST00000625854 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
LEMD1-209ENST00000625854 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
LEMD1-209ENST00000625854 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
LEMD1-209ENST00000625854 NACADO15069 1562 aa18.62■□□□□ 0.57
LEMD1-209ENST00000625854 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
LEMD1-209ENST00000625854 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
LEMD1-209ENST00000625854 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
LEMD1-209ENST00000625854 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.51
LEMD1-209ENST00000625854 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
LEMD1-209ENST00000625854 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
LEMD1-209ENST00000625854 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
LEMD1-209ENST00000625854 SCRIBQ14160 1630 aa18■□□□□ 0.47
LEMD1-209ENST00000625854 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
LEMD1-209ENST00000625854 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
LEMD1-209ENST00000625854 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
LEMD1-209ENST00000625854 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
LEMD1-209ENST00000625854 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
LEMD1-209ENST00000625854 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
LEMD1-209ENST00000625854 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
LEMD1-209ENST00000625854 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
LEMD1-209ENST00000625854 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
LEMD1-209ENST00000625854 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
LEMD1-209ENST00000625854 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.32
LEMD1-209ENST00000625854 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
LEMD1-209ENST00000625854 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
LEMD1-209ENST00000625854 CUX2O14529 1486 aa16.99■□□□□ 0.31
LEMD1-209ENST00000625854 NESP48681 1621 aa16.98■□□□□ 0.31
LEMD1-209ENST00000625854 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
LEMD1-209ENST00000625854 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
LEMD1-209ENST00000625854 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
LEMD1-209ENST00000625854 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
LEMD1-209ENST00000625854 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
LEMD1-209ENST00000625854 WIZO95785 1651 aa16.75■□□□□ 0.27
LEMD1-209ENST00000625854 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
LEMD1-209ENST00000625854 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
LEMD1-209ENST00000625854 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
LEMD1-209ENST00000625854 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
LEMD1-209ENST00000625854 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
LEMD1-209ENST00000625854 WDR62O43379 1518 aa16.51■□□□□ 0.23
LEMD1-209ENST00000625854 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
LEMD1-209ENST00000625854 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
LEMD1-209ENST00000625854 CFTRP13569 1480 aa16.47■□□□□ 0.23
LEMD1-209ENST00000625854 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
LEMD1-209ENST00000625854 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
LEMD1-209ENST00000625854 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
LEMD1-209ENST00000625854 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
LEMD1-209ENST00000625854 PRDM2Q13029 1718 aa16.32■□□□□ 0.2
LEMD1-209ENST00000625854 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
LEMD1-209ENST00000625854 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
LEMD1-209ENST00000625854 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
LEMD1-209ENST00000625854 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
LEMD1-209ENST00000625854 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
LEMD1-209ENST00000625854 FBLN2P98095 1184 aa16.08■□□□□ 0.16
LEMD1-209ENST00000625854 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
LEMD1-209ENST00000625854 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
LEMD1-209ENST00000625854 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
LEMD1-209ENST00000625854 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
LEMD1-209ENST00000625854 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
LEMD1-209ENST00000625854 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
LEMD1-209ENST00000625854 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
LEMD1-209ENST00000625854 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
LEMD1-209ENST00000625854 SOGA1O94964 1423 aa16■□□□□ 0.15
LEMD1-209ENST00000625854 CHD1O14646 1710 aa15.99■□□□□ 0.15
LEMD1-209ENST00000625854 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
LEMD1-209ENST00000625854 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
LEMD1-209ENST00000625854 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
LEMD1-209ENST00000625854 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
LEMD1-209ENST00000625854 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
LEMD1-209ENST00000625854 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
LEMD1-209ENST00000625854 CUX1P39880 1505 aa15.89■□□□□ 0.13
LEMD1-209ENST00000625854 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
LEMD1-209ENST00000625854 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
LEMD1-209ENST00000625854 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
LEMD1-209ENST00000625854 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
LEMD1-209ENST00000625854 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
LEMD1-209ENST00000625854 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
LEMD1-209ENST00000625854 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
LEMD1-209ENST00000625854 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
LEMD1-209ENST00000625854 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
LEMD1-209ENST00000625854 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
LEMD1-209ENST00000625854 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
LEMD1-209ENST00000625854 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
LEMD1-209ENST00000625854 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
LEMD1-209ENST00000625854 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
LEMD1-209ENST00000625854 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
LEMD1-209ENST00000625854 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
LEMD1-209ENST00000625854 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
LEMD1-209ENST00000625854 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
LEMD1-209ENST00000625854 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
LEMD1-209ENST00000625854 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
LEMD1-209ENST00000625854 ERCC6L2Q5T890 1561 aa15.54■□□□□ 0.08
LEMD1-209ENST00000625854 NUP160Q12769 1436 aa15.52■□□□□ 0.08
LEMD1-209ENST00000625854 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
LEMD1-209ENST00000625854 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
LEMD1-209ENST00000625854 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
LEMD1-209ENST00000625854 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
LEMD1-209ENST00000625854 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
LEMD1-209ENST00000625854 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms