RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 NISCHQ9Y2I1 1504 aa48.44■■■■■ 5.35
SUPT16H-203ENST00000555752 ABCC9O60706 1549 aa44.29■■■■■ 4.68
SUPT16H-203ENST00000555752 CCDC180Q9P1Z9 1646 aa43.63■■■■■ 4.58
SUPT16H-203ENST00000555752 DNAJC5BQ9UF47 199 aa42.07■■■■■ 4.33
SUPT16H-203ENST00000555752 RB1CC1Q8TDY2 1594 aa41.81■■■■■ 4.28
SUPT16H-203ENST00000555752 NACADO15069 1562 aa41.37■■■■■ 4.21
SUPT16H-203ENST00000555752 DCAF8L2P0C7V8 631 aa41.18■■■■■ 4.18
SUPT16H-203ENST00000555752 PABPN1Q86U42 306 aaKnown RBP eCLIP41.17■■■■■ 4.18
SUPT16H-203ENST00000555752 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
SUPT16H-203ENST00000555752 BICRAQ9NZM4 1560 aa40.7■■■■■ 4.11
SUPT16H-203ENST00000555752 MYO15BQ96JP2 1530 aa40.58■■■■■ 4.09
SUPT16H-203ENST00000555752 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
SUPT16H-203ENST00000555752 CC2D2AQ9P2K1 1620 aa39.94■■■■□ 3.99
SUPT16H-203ENST00000555752 SHROOM4Q9ULL8 1493 aa39.92■■■■□ 3.98
SUPT16H-203ENST00000555752 DCAF1Q9Y4B6 1507 aa39.9■■■■□ 3.98
SUPT16H-203ENST00000555752 CECR2Q9BXF3 1484 aa39.89■■■■□ 3.98
SUPT16H-203ENST00000555752 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
SUPT16H-203ENST00000555752 EIF4G1Q04637 1599 aaKnown RBP39.71■■■■□ 3.95
SUPT16H-203ENST00000555752 DNAJC5Q9H3Z4 198 aa38.9■■■■□ 3.82
SUPT16H-203ENST00000555752 CUX2O14529 1486 aa38.26■■■■□ 3.72
SUPT16H-203ENST00000555752 NCAPD3P42695 1498 aa38.22■■■■□ 3.71
SUPT16H-203ENST00000555752 ERCC6Q03468 1493 aa38.21■■■■□ 3.71
SUPT16H-203ENST00000555752 ATAD2BQ9ULI0 1458 aa38.08■■■■□ 3.69
SUPT16H-203ENST00000555752 NESP48681 1621 aa37.92■■■■□ 3.66
SUPT16H-203ENST00000555752 SMARCA4P51532 1647 aa37.9■■■■□ 3.66
SUPT16H-203ENST00000555752 HMGXB3Q12766 1538 aa37.88■■■■□ 3.65
SUPT16H-203ENST00000555752 SMARCA2P51531 1590 aa37.88■■■■□ 3.65
SUPT16H-203ENST00000555752 BAZ1BQ9UIG0 1483 aaKnown RBP37.66■■■■□ 3.62
SUPT16H-203ENST00000555752 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
SUPT16H-203ENST00000555752 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
SUPT16H-203ENST00000555752 PEG3Q9GZU2 1588 aa37.49■■■■□ 3.59
SUPT16H-203ENST00000555752 LAMC3Q9Y6N6 1575 aa37.44■■■■□ 3.58
SUPT16H-203ENST00000555752 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.57
SUPT16H-203ENST00000555752 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
SUPT16H-203ENST00000555752 PDS5BQ9NTI5 1447 aa37.23■■■■□ 3.55
SUPT16H-203ENST00000555752 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
SUPT16H-203ENST00000555752 TRIM41Q8WV44 630 aa37.05■■■■□ 3.52
SUPT16H-203ENST00000555752 MRC2Q9UBG0 1479 aa36.98■■■■□ 3.51
SUPT16H-203ENST00000555752 WIZO95785 1651 aa36.92■■■■□ 3.5
SUPT16H-203ENST00000555752 WDR62O43379 1518 aa36.9■■■■□ 3.5
SUPT16H-203ENST00000555752 CEP164Q9UPV0 1460 aa36.73■■■■□ 3.47
SUPT16H-203ENST00000555752 FANCD2Q9BXW9 1451 aa36.67■■■■□ 3.46
SUPT16H-203ENST00000555752 CFTRP13569 1480 aa36.52■■■■□ 3.44
SUPT16H-203ENST00000555752 OSCARQ8IYS5 282 aa36.45■■■■□ 3.43
SUPT16H-203ENST00000555752 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
SUPT16H-203ENST00000555752 RSF1Q96T23 1441 aaPredicted RBP36.38■■■■□ 3.41
SUPT16H-203ENST00000555752 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
SUPT16H-203ENST00000555752 RIMBP3CA6NJZ7 1639 aa36.11■■■■□ 3.37
SUPT16H-203ENST00000555752 RIMBP3BA6NNM3 1639 aa36.11■■■■□ 3.37
SUPT16H-203ENST00000555752 RIMBP3Q9UFD9 1639 aa36.11■■■■□ 3.37
SUPT16H-203ENST00000555752 ZNF608Q9ULD9 1512 aaPredicted RBP36.1■■■■□ 3.37
SUPT16H-203ENST00000555752 PRDM2Q13029 1718 aa36.1■■■■□ 3.37
SUPT16H-203ENST00000555752 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
SUPT16H-203ENST00000555752 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
SUPT16H-203ENST00000555752 ARHGEF11O15085 1522 aa35.92■■■■□ 3.34
SUPT16H-203ENST00000555752 TOPBP1Q92547 1522 aa35.92■■■■□ 3.34
SUPT16H-203ENST00000555752 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
SUPT16H-203ENST00000555752 CYB5RLQ6IPT4 315 aa35.71■■■■□ 3.31
SUPT16H-203ENST00000555752 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
SUPT16H-203ENST00000555752 ABCC8Q09428 1581 aa35.69■■■■□ 3.3
SUPT16H-203ENST00000555752 AQRO60306 1485 aaKnown RBP eCLIP35.68■■■■□ 3.3
SUPT16H-203ENST00000555752 CHD1O14646 1710 aa35.68■■■■□ 3.3
SUPT16H-203ENST00000555752 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
SUPT16H-203ENST00000555752 ARAP1Q96P48 1450 aa35.55■■■■□ 3.28
SUPT16H-203ENST00000555752 FBLN2P98095 1184 aa35.55■■■■□ 3.28
SUPT16H-203ENST00000555752 POLA1P09884 1462 aaPredicted RBP35.52■■■■□ 3.28
SUPT16H-203ENST00000555752 TRHP20396 242 aaPredicted RBP35.47■■■■□ 3.27
SUPT16H-203ENST00000555752 RAD54L2Q9Y4B4 1467 aa35.45■■■■□ 3.27
SUPT16H-203ENST00000555752 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.26
SUPT16H-203ENST00000555752 SOGA1O94964 1423 aa35.33■■■■□ 3.25
SUPT16H-203ENST00000555752 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
SUPT16H-203ENST00000555752 FGD5Q6ZNL6 1462 aa35.23■■■■□ 3.23
SUPT16H-203ENST00000555752 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
SUPT16H-203ENST00000555752 CHMP7Q8WUX9 453 aaPredicted RBP35.15■■■■□ 3.22
SUPT16H-203ENST00000555752 CUX1P39880 1505 aa35.14■■■■□ 3.22
SUPT16H-203ENST00000555752 WDR97A6NE52 1622 aa35.12■■■■□ 3.21
SUPT16H-203ENST00000555752 SYNJ1O43426 1573 aa35.11■■■■□ 3.21
SUPT16H-203ENST00000555752 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
SUPT16H-203ENST00000555752 GRIN2BQ13224 1484 aa35.06■■■■□ 3.2
SUPT16H-203ENST00000555752 SYNJ2O15056 1496 aa35.01■■■■□ 3.19
SUPT16H-203ENST00000555752 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
SUPT16H-203ENST00000555752 GAPVD1Q14C86 1478 aa34.89■■■■□ 3.18
SUPT16H-203ENST00000555752 ABCA5Q8WWZ7 1642 aa34.78■■■■□ 3.16
SUPT16H-203ENST00000555752 AEBP2Q6ZN18 517 aaPredicted RBP34.78■■■■□ 3.16
SUPT16H-203ENST00000555752 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.15
SUPT16H-203ENST00000555752 ERCC6L2Q5T890 1561 aa34.73■■■■□ 3.15
SUPT16H-203ENST00000555752 GRIN2AQ12879 1464 aa34.63■■■■□ 3.13
SUPT16H-203ENST00000555752 CEP170Q5SW79 1584 aa34.58■■■■□ 3.13
SUPT16H-203ENST00000555752 ADAMTS12P58397 1594 aa34.56■■■■□ 3.12
SUPT16H-203ENST00000555752 NUP160Q12769 1436 aa34.53■■■■□ 3.12
SUPT16H-203ENST00000555752 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
SUPT16H-203ENST00000555752 SHROOM2Q13796 1616 aa34.44■■■■□ 3.1
SUPT16H-203ENST00000555752 SUPT5HO00267 1087 aaKnown RBP34.44■■■■□ 3.1
SUPT16H-203ENST00000555752 FHAD1B1AJZ9 1412 aa34.4■■■■□ 3.1
SUPT16H-203ENST00000555752 BIVM-ERCC5R4GMW8 1640 aa34.39■■■■□ 3.1
SUPT16H-203ENST00000555752 TOP2BQ02880 1626 aa34.38■■■■□ 3.09
SUPT16H-203ENST00000555752 KIF13AQ9H1H9 1805 aa34.31■■■■□ 3.08
SUPT16H-203ENST00000555752 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
SUPT16H-203ENST00000555752 PRG4Q92954 1404 aaPredicted RBP34.27■■■■□ 3.08
SUPT16H-203ENST00000555752 JPH4Q96JJ6 628 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms