RNA–Protein interactions for RNA: ENST00000558791.5

CTDSPL2-203, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-203ENST00000558791 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
CTDSPL2-203ENST00000558791 ABCC9O60706 1549 aa24.16■■□□□ 1.46
CTDSPL2-203ENST00000558791 CCDC180Q9P1Z9 1646 aa24.12■■□□□ 1.45
CTDSPL2-203ENST00000558791 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
CTDSPL2-203ENST00000558791 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
CTDSPL2-203ENST00000558791 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
CTDSPL2-203ENST00000558791 NACADO15069 1562 aa22.84■■□□□ 1.25
CTDSPL2-203ENST00000558791 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
CTDSPL2-203ENST00000558791 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
CTDSPL2-203ENST00000558791 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.19
CTDSPL2-203ENST00000558791 UNC13AQ9UPW8 1703 aa22.47■■□□□ 1.19
CTDSPL2-203ENST00000558791 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.18
CTDSPL2-203ENST00000558791 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
CTDSPL2-203ENST00000558791 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
CTDSPL2-203ENST00000558791 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
CTDSPL2-203ENST00000558791 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
CTDSPL2-203ENST00000558791 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
CTDSPL2-203ENST00000558791 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
CTDSPL2-203ENST00000558791 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
CTDSPL2-203ENST00000558791 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
CTDSPL2-203ENST00000558791 DNAJC5Q9H3Z4 198 aa21.21■□□□□ 0.99
CTDSPL2-203ENST00000558791 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
CTDSPL2-203ENST00000558791 CUX2O14529 1486 aa21.04■□□□□ 0.96
CTDSPL2-203ENST00000558791 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CTDSPL2-203ENST00000558791 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
CTDSPL2-203ENST00000558791 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
CTDSPL2-203ENST00000558791 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
CTDSPL2-203ENST00000558791 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
CTDSPL2-203ENST00000558791 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
CTDSPL2-203ENST00000558791 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
CTDSPL2-203ENST00000558791 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
CTDSPL2-203ENST00000558791 NESP48681 1621 aa20.67■□□□□ 0.9
CTDSPL2-203ENST00000558791 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
CTDSPL2-203ENST00000558791 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
CTDSPL2-203ENST00000558791 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
CTDSPL2-203ENST00000558791 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
CTDSPL2-203ENST00000558791 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
CTDSPL2-203ENST00000558791 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
CTDSPL2-203ENST00000558791 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
CTDSPL2-203ENST00000558791 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
CTDSPL2-203ENST00000558791 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
CTDSPL2-203ENST00000558791 WDR62O43379 1518 aa20.27■□□□□ 0.84
CTDSPL2-203ENST00000558791 WIZO95785 1651 aa20.26■□□□□ 0.83
CTDSPL2-203ENST00000558791 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
CTDSPL2-203ENST00000558791 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
CTDSPL2-203ENST00000558791 CFTRP13569 1480 aa20.12■□□□□ 0.81
CTDSPL2-203ENST00000558791 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
CTDSPL2-203ENST00000558791 TOP2AP11388 1531 aaKnown RBP20.03■□□□□ 0.8
CTDSPL2-203ENST00000558791 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
CTDSPL2-203ENST00000558791 OSCARQ8IYS5 282 aa20.01■□□□□ 0.79
CTDSPL2-203ENST00000558791 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
CTDSPL2-203ENST00000558791 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
CTDSPL2-203ENST00000558791 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
CTDSPL2-203ENST00000558791 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
CTDSPL2-203ENST00000558791 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
CTDSPL2-203ENST00000558791 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
CTDSPL2-203ENST00000558791 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
CTDSPL2-203ENST00000558791 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
CTDSPL2-203ENST00000558791 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
CTDSPL2-203ENST00000558791 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
CTDSPL2-203ENST00000558791 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
CTDSPL2-203ENST00000558791 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
CTDSPL2-203ENST00000558791 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
CTDSPL2-203ENST00000558791 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.73
CTDSPL2-203ENST00000558791 CHD1O14646 1710 aa19.54■□□□□ 0.72
CTDSPL2-203ENST00000558791 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
CTDSPL2-203ENST00000558791 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
CTDSPL2-203ENST00000558791 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
CTDSPL2-203ENST00000558791 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
CTDSPL2-203ENST00000558791 FBLN2P98095 1184 aa19.44■□□□□ 0.7
CTDSPL2-203ENST00000558791 SOGA1O94964 1423 aa19.43■□□□□ 0.7
CTDSPL2-203ENST00000558791 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
CTDSPL2-203ENST00000558791 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
CTDSPL2-203ENST00000558791 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
CTDSPL2-203ENST00000558791 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CTDSPL2-203ENST00000558791 FGD5Q6ZNL6 1462 aa19.35■□□□□ 0.69
CTDSPL2-203ENST00000558791 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
CTDSPL2-203ENST00000558791 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
CTDSPL2-203ENST00000558791 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
CTDSPL2-203ENST00000558791 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
CTDSPL2-203ENST00000558791 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
CTDSPL2-203ENST00000558791 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
CTDSPL2-203ENST00000558791 CUX1P39880 1505 aa19.29■□□□□ 0.68
CTDSPL2-203ENST00000558791 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
CTDSPL2-203ENST00000558791 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
CTDSPL2-203ENST00000558791 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
CTDSPL2-203ENST00000558791 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
CTDSPL2-203ENST00000558791 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.65
CTDSPL2-203ENST00000558791 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
CTDSPL2-203ENST00000558791 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
CTDSPL2-203ENST00000558791 ADAMTS12P58397 1594 aa19■□□□□ 0.63
CTDSPL2-203ENST00000558791 NUP160Q12769 1436 aa19■□□□□ 0.63
CTDSPL2-203ENST00000558791 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
CTDSPL2-203ENST00000558791 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
CTDSPL2-203ENST00000558791 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
CTDSPL2-203ENST00000558791 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
CTDSPL2-203ENST00000558791 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
CTDSPL2-203ENST00000558791 FOXD1Q16676 465 aa18.95■□□□□ 0.62
CTDSPL2-203ENST00000558791 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
CTDSPL2-203ENST00000558791 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms