RNA–Protein interactions for RNA: ENST00000547098.5

MRPL42-203, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3 BASIC

Gene MRPL42, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-203ENST00000547098 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
MRPL42-203ENST00000547098 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
MRPL42-203ENST00000547098 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
MRPL42-203ENST00000547098 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
MRPL42-203ENST00000547098 FOXD1Q16676 465 aa22.14■■□□□ 1.13
MRPL42-203ENST00000547098 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
MRPL42-203ENST00000547098 MSH5O43196 834 aa20.92■□□□□ 0.94
MRPL42-203ENST00000547098 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
MRPL42-203ENST00000547098 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
MRPL42-203ENST00000547098 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
MRPL42-203ENST00000547098 ADRA2BP18089 450 aa20.2■□□□□ 0.82
MRPL42-203ENST00000547098 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
MRPL42-203ENST00000547098 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
MRPL42-203ENST00000547098 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
MRPL42-203ENST00000547098 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
MRPL42-203ENST00000547098 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
MRPL42-203ENST00000547098 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
MRPL42-203ENST00000547098 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
MRPL42-203ENST00000547098 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
MRPL42-203ENST00000547098 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
MRPL42-203ENST00000547098 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
MRPL42-203ENST00000547098 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
MRPL42-203ENST00000547098 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
MRPL42-203ENST00000547098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.318e-10■■■□□ 17.4
MRPL42-203ENST00000547098 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
MRPL42-203ENST00000547098 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
MRPL42-203ENST00000547098 POTEHQ6S545 545 aa16.63■□□□□ 0.25
MRPL42-203ENST00000547098 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
MRPL42-203ENST00000547098 DSG3P32926 999 aa16.49■□□□□ 0.23
MRPL42-203ENST00000547098 CAPN15O75808 1086 aa16.48■□□□□ 0.23
MRPL42-203ENST00000547098 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
MRPL42-203ENST00000547098 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
MRPL42-203ENST00000547098 ABCB7O75027 752 aa16.05■□□□□ 0.16
MRPL42-203ENST00000547098 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
MRPL42-203ENST00000547098 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
MRPL42-203ENST00000547098 APLP2Q06481 763 aa16■□□□□ 0.15
MRPL42-203ENST00000547098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
MRPL42-203ENST00000547098 KCNA4P22459 653 aa15.85■□□□□ 0.13
MRPL42-203ENST00000547098 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
MRPL42-203ENST00000547098 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
MRPL42-203ENST00000547098 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
MRPL42-203ENST00000547098 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
MRPL42-203ENST00000547098 POLA2Q14181 598 aa15.51■□□□□ 0.07
MRPL42-203ENST00000547098 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
MRPL42-203ENST00000547098 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
MRPL42-203ENST00000547098 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
MRPL42-203ENST00000547098 PIP4P2Q8N4L2 257 aa15.15■□□□□ 0.02
MRPL42-203ENST00000547098 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
MRPL42-203ENST00000547098 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
MRPL42-203ENST00000547098 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
MRPL42-203ENST00000547098 OSCARQ8IYS5 282 aa15.04■□□□□ -0
MRPL42-203ENST00000547098 HAX1O00165 279 aa15.02■□□□□ -0
MRPL42-203ENST00000547098 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
MRPL42-203ENST00000547098 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
MRPL42-203ENST00000547098 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
MRPL42-203ENST00000547098 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
MRPL42-203ENST00000547098 EVX2Q03828 476 aa14.79□□□□□ -0.04
MRPL42-203ENST00000547098 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
MRPL42-203ENST00000547098 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
MRPL42-203ENST00000547098 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
MRPL42-203ENST00000547098 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
MRPL42-203ENST00000547098 ZBTB22O15209 634 aa14.57□□□□□ -0.08
MRPL42-203ENST00000547098 FBLN2P98095 1184 aa14.55□□□□□ -0.08
MRPL42-203ENST00000547098 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
MRPL42-203ENST00000547098 ATXN8OSP0DMR3 200 aa14.53□□□□□ -0.08
MRPL42-203ENST00000547098 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
MRPL42-203ENST00000547098 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
MRPL42-203ENST00000547098 GABBR2O75899 941 aa14.42□□□□□ -0.1
MRPL42-203ENST00000547098 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
MRPL42-203ENST00000547098 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
MRPL42-203ENST00000547098 LHX8Q68G74 356 aa14.37□□□□□ -0.11
MRPL42-203ENST00000547098 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
MRPL42-203ENST00000547098 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
MRPL42-203ENST00000547098 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
MRPL42-203ENST00000547098 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
MRPL42-203ENST00000547098 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
MRPL42-203ENST00000547098 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
MRPL42-203ENST00000547098 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
MRPL42-203ENST00000547098 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
MRPL42-203ENST00000547098 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
MRPL42-203ENST00000547098 CLCN6P51797 869 aa13.97□□□□□ -0.17
MRPL42-203ENST00000547098 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
MRPL42-203ENST00000547098 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
MRPL42-203ENST00000547098 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
MRPL42-203ENST00000547098 ZRANB1Q9UGI0 708 aa13.82□□□□□ -0.2
MRPL42-203ENST00000547098 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
MRPL42-203ENST00000547098 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
MRPL42-203ENST00000547098 OTUD5Q96G74 571 aa13.7□□□□□ -0.22
MRPL42-203ENST00000547098 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
MRPL42-203ENST00000547098 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
MRPL42-203ENST00000547098 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
MRPL42-203ENST00000547098 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
MRPL42-203ENST00000547098 POTEMA6NI47 508 aa13.57□□□□□ -0.24
MRPL42-203ENST00000547098 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
MRPL42-203ENST00000547098 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
MRPL42-203ENST00000547098 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
MRPL42-203ENST00000547098 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
MRPL42-203ENST00000547098 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
MRPL42-203ENST00000547098 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
MRPL42-203ENST00000547098 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms