Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHGA2Q9Y5H1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA2Q9Y5H1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHGA2Q9Y5H1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHGA2Q9Y5H1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDHGA2Q9Y5H1 AP004833.2-201ENST00000532228 1454 ntBASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHGA2Q9Y5H1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHGA2Q9Y5H1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHGA2Q9Y5H1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGA2Q9Y5H1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA2Q9Y5H1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.81■■□□□ 1.56
PCDHGA2Q9Y5H1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHGA2Q9Y5H1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHGA2Q9Y5H1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDHGA2Q9Y5H1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA2Q9Y5H1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA2Q9Y5H1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHGA2Q9Y5H1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHGA2Q9Y5H1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
PCDHGA2Q9Y5H1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHGA2Q9Y5H1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHGA2Q9Y5H1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHGA2Q9Y5H1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHGA2Q9Y5H1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHGA2Q9Y5H1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHGA2Q9Y5H1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDHGA2Q9Y5H1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGA2Q9Y5H1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHGA2Q9Y5H1 AL139393.2-201ENST00000608721 2025 ntBASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 MIR638-201ENST00000385237 100 ntBASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHGA2Q9Y5H1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGA2Q9Y5H1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHGA2Q9Y5H1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGA2Q9Y5H1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA2Q9Y5H1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA2Q9Y5H1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDHGA2Q9Y5H1 KRT125P-201ENST00000546827 989 ntBASIC24.73■■□□□ 1.55
PCDHGA2Q9Y5H1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHGA2Q9Y5H1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDHGA2Q9Y5H1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA2Q9Y5H1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA2Q9Y5H1 AC100797.4-201ENST00000631653 1827 ntBASIC24.71■■□□□ 1.55
PCDHGA2Q9Y5H1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDHGA2Q9Y5H1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHGA2Q9Y5H1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.7■■□□□ 1.55
PCDHGA2Q9Y5H1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 AC087393.1-201ENST00000582896 145 ntBASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA2Q9Y5H1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA2Q9Y5H1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA2Q9Y5H1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA2Q9Y5H1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHGA2Q9Y5H1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA2Q9Y5H1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA2Q9Y5H1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
PCDHGA2Q9Y5H1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA2Q9Y5H1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGA2Q9Y5H1 LONRF2P2-201ENST00000439212 571 ntBASIC24.67■■□□□ 1.54
PCDHGA2Q9Y5H1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDHGA2Q9Y5H1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA2Q9Y5H1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 MIR4787-201ENST00000607364 84 ntBASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDHGA2Q9Y5H1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 BX664725.1-201ENST00000438252 379 ntBASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA2Q9Y5H1 AL139246.5-201ENST00000606645 996 ntBASIC24.64■■□□□ 1.54
PCDHGA2Q9Y5H1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA2Q9Y5H1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHGA2Q9Y5H1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms