Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH20Q8N6Y1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH20Q8N6Y1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH20Q8N6Y1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 KRT18P60-201ENST00000312876 1297 ntBASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 RAP2CP1-202ENST00000605179 643 ntBASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH20Q8N6Y1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 AC142472.1-201ENST00000612013 1741 ntBASIC24.83■■□□□ 1.57
PCDH20Q8N6Y1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PCDH20Q8N6Y1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.83■■□□□ 1.56
PCDH20Q8N6Y1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDH20Q8N6Y1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PCDH20Q8N6Y1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 AC012354.3-201ENST00000623734 483 ntBASIC24.82■■□□□ 1.56
PCDH20Q8N6Y1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 AL592293.1-201ENST00000502889 1188 ntBASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.81■■□□□ 1.56
PCDH20Q8N6Y1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDH20Q8N6Y1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH20Q8N6Y1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH20Q8N6Y1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDH20Q8N6Y1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PCDH20Q8N6Y1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH20Q8N6Y1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDH20Q8N6Y1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH20Q8N6Y1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
PCDH20Q8N6Y1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH20Q8N6Y1 AP004609.3-201ENST00000610705 1884 ntBASIC24.77■■□□□ 1.56
PCDH20Q8N6Y1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDH20Q8N6Y1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH20Q8N6Y1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 AC129492.7-201ENST00000622992 756 ntBASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH20Q8N6Y1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.73■■□□□ 1.55
PCDH20Q8N6Y1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH20Q8N6Y1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH20Q8N6Y1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
PCDH20Q8N6Y1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDH20Q8N6Y1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH20Q8N6Y1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.55
PCDH20Q8N6Y1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDH20Q8N6Y1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 TSPY13P-201ENST00000338964 914 ntBASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 AC004987.1-201ENST00000428627 508 ntBASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 ATP5G2P3-201ENST00000429083 425 ntBASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDH20Q8N6Y1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms