Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM60Q495X7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM60Q495X7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM60Q495X7 RPS2P7-201ENST00000447334 885 ntBASIC27.19■■□□□ 1.94
TRIM60Q495X7 KRT125P-201ENST00000546827 989 ntBASIC27.19■■□□□ 1.94
TRIM60Q495X7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM60Q495X7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
TRIM60Q495X7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TRIM60Q495X7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
TRIM60Q495X7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.18■■□□□ 1.94
TRIM60Q495X7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.18■■□□□ 1.94
TRIM60Q495X7 MIR4787-201ENST00000607364 84 ntBASIC27.18■■□□□ 1.94
TRIM60Q495X7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.18■■□□□ 1.94
TRIM60Q495X7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TRIM60Q495X7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.17■■□□□ 1.94
TRIM60Q495X7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.17■■□□□ 1.94
TRIM60Q495X7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.17■■□□□ 1.94
TRIM60Q495X7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
TRIM60Q495X7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.16■■□□□ 1.94
TRIM60Q495X7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.16■■□□□ 1.94
TRIM60Q495X7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM60Q495X7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
TRIM60Q495X7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.15■■□□□ 1.94
TRIM60Q495X7 UNC93B8-201ENST00000511903 705 ntBASIC27.15■■□□□ 1.94
TRIM60Q495X7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TRIM60Q495X7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRIM60Q495X7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM60Q495X7 MIR638-201ENST00000385237 100 ntBASIC27.14■■□□□ 1.94
TRIM60Q495X7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.14■■□□□ 1.94
TRIM60Q495X7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.14■■□□□ 1.94
TRIM60Q495X7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM60Q495X7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.14■■□□□ 1.93
TRIM60Q495X7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM60Q495X7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM60Q495X7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.13■■□□□ 1.93
TRIM60Q495X7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
TRIM60Q495X7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM60Q495X7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM60Q495X7 BX664725.1-201ENST00000438252 379 ntBASIC27.13■■□□□ 1.93
TRIM60Q495X7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.13■■□□□ 1.93
TRIM60Q495X7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
TRIM60Q495X7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM60Q495X7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.13■■□□□ 1.93
TRIM60Q495X7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.12■■□□□ 1.93
TRIM60Q495X7 AL139393.2-201ENST00000608721 2025 ntBASIC27.12■■□□□ 1.93
TRIM60Q495X7 KRT16P3-201ENST00000439127 1283 ntBASIC27.11■■□□□ 1.93
TRIM60Q495X7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.11■■□□□ 1.93
TRIM60Q495X7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM60Q495X7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM60Q495X7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM60Q495X7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.1■■□□□ 1.93
TRIM60Q495X7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.1■■□□□ 1.93
TRIM60Q495X7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.1■■□□□ 1.93
TRIM60Q495X7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
TRIM60Q495X7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM60Q495X7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM60Q495X7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM60Q495X7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM60Q495X7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM60Q495X7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
TRIM60Q495X7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM60Q495X7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
TRIM60Q495X7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM60Q495X7 WHAMMP3-201ENST00000611636 1609 ntBASIC27.07■■□□□ 1.92
TRIM60Q495X7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM60Q495X7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM60Q495X7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM60Q495X7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.06■■□□□ 1.92
TRIM60Q495X7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.05■■□□□ 1.92
TRIM60Q495X7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
TRIM60Q495X7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.05■■□□□ 1.92
TRIM60Q495X7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM60Q495X7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.05■■□□□ 1.92
TRIM60Q495X7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM60Q495X7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.05■■□□□ 1.92
TRIM60Q495X7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM60Q495X7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM60Q495X7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.04■■□□□ 1.92
TRIM60Q495X7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
TRIM60Q495X7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.04■■□□□ 1.92
TRIM60Q495X7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM60Q495X7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM60Q495X7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.03■■□□□ 1.92
TRIM60Q495X7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM60Q495X7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM60Q495X7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM60Q495X7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.02■■□□□ 1.92
TRIM60Q495X7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM60Q495X7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.02■■□□□ 1.92
TRIM60Q495X7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
TRIM60Q495X7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.01■■□□□ 1.91
TRIM60Q495X7 TSPY9P-201ENST00000440215 945 ntBASIC27.01■■□□□ 1.91
TRIM60Q495X7 TSPY11P-201ENST00000442607 1045 ntBASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms