Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PDX1P52945 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.71■■□□□ 1.39
PDX1P52945 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDX1P52945 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDX1P52945 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.71■■□□□ 1.39
PDX1P52945 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.71■■□□□ 1.39
PDX1P52945 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.7■■□□□ 1.38
PDX1P52945 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.7■■□□□ 1.38
PDX1P52945 AC103834.1-201ENST00000520383 144 ntBASIC23.7■■□□□ 1.38
PDX1P52945 AC074183.2-201ENST00000623112 922 ntBASIC23.7■■□□□ 1.38
PDX1P52945 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDX1P52945 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PDX1P52945 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDX1P52945 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDX1P52945 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.69■■□□□ 1.38
PDX1P52945 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDX1P52945 PVT1_1.1-201ENST00000615125 194 ntBASIC23.69■■□□□ 1.38
PDX1P52945 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.68■■□□□ 1.38
PDX1P52945 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 AL359504.2-201ENST00000605506 1601 ntBASIC23.68■■□□□ 1.38
PDX1P52945 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PDX1P52945 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PDX1P52945 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PDX1P52945 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDX1P52945 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PDX1P52945 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.67■■□□□ 1.38
PDX1P52945 AC139795.1-202ENST00000500444 432 ntBASIC23.67■■□□□ 1.38
PDX1P52945 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.67■■□□□ 1.38
PDX1P52945 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDX1P52945 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDX1P52945 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.67■■□□□ 1.38
PDX1P52945 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.66■■□□□ 1.38
PDX1P52945 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PDX1P52945 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PDX1P52945 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PDX1P52945 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDX1P52945 AC009299.2-201ENST00000482477 511 ntBASIC23.65■■□□□ 1.38
PDX1P52945 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDX1P52945 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDX1P52945 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDX1P52945 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.64■■□□□ 1.37
PDX1P52945 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.63■■□□□ 1.37
PDX1P52945 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDX1P52945 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDX1P52945 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PDX1P52945 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.63■■□□□ 1.37
PDX1P52945 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDX1P52945 AC018755.3-202ENST00000596210 929 ntBASIC23.63■■□□□ 1.37
PDX1P52945 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.63■■□□□ 1.37
PDX1P52945 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDX1P52945 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.62■■□□□ 1.37
PDX1P52945 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDX1P52945 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDX1P52945 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDX1P52945 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDX1P52945 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDX1P52945 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.6■■□□□ 1.37
PDX1P52945 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PDX1P52945 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
PDX1P52945 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDX1P52945 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDX1P52945 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDX1P52945 YBX1P4-201ENST00000392794 808 ntBASIC23.59■■□□□ 1.37
PDX1P52945 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.59■■□□□ 1.37
PDX1P52945 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
PDX1P52945 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.59■■□□□ 1.37
PDX1P52945 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDX1P52945 WHAMMP3-201ENST00000611636 1609 ntBASIC23.59■■□□□ 1.37
PDX1P52945 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDX1P52945 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDX1P52945 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
PDX1P52945 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDX1P52945 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDX1P52945 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.58■■□□□ 1.36
PDX1P52945 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PDX1P52945 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDX1P52945 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.57■■□□□ 1.36
PDX1P52945 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDX1P52945 MIR4508-201ENST00000584178 70 ntBASIC23.57■■□□□ 1.36
PDX1P52945 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDX1P52945 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDX1P52945 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDX1P52945 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDX1P52945 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.56■■□□□ 1.36
PDX1P52945 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.56■■□□□ 1.36
PDX1P52945 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDX1P52945 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PDX1P52945 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDX1P52945 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDX1P52945 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.55■■□□□ 1.36
PDX1P52945 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms