Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
PAX4O43316 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.61□□□□□ -0.39
PAX4O43316 KRT18P55-202ENST00000578578 1546 ntBASIC12.61□□□□□ -0.39
PAX4O43316 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.61□□□□□ -0.39
PAX4O43316 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.61□□□□□ -0.39
PAX4O43316 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
PAX4O43316 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
PAX4O43316 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PAX4O43316 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 IER3-202ENST00000376377 1350 ntBASIC12.6□□□□□ -0.39
PAX4O43316 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.6□□□□□ -0.39
PAX4O43316 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.6□□□□□ -0.39
PAX4O43316 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.6□□□□□ -0.39
PAX4O43316 AC090616.6-201ENST00000582640 721 ntBASIC12.6□□□□□ -0.39
PAX4O43316 AL445228.2-201ENST00000605589 952 ntBASIC12.6□□□□□ -0.39
PAX4O43316 AC091076.1-201ENST00000610741 619 ntBASIC12.6□□□□□ -0.39
PAX4O43316 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
PAX4O43316 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.6□□□□□ -0.39
PAX4O43316 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.6□□□□□ -0.39
PAX4O43316 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.6□□□□□ -0.39
PAX4O43316 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PAX4O43316 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PAX4O43316 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.59□□□□□ -0.39
PAX4O43316 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.59□□□□□ -0.39
PAX4O43316 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.59□□□□□ -0.39
PAX4O43316 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.59□□□□□ -0.39
PAX4O43316 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.59□□□□□ -0.39
PAX4O43316 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.59□□□□□ -0.39
PAX4O43316 AC124864.1-201ENST00000623408 392 ntBASIC12.59□□□□□ -0.39
PAX4O43316 AP000550.4-202ENST00000639755 178 ntBASIC12.59□□□□□ -0.39
PAX4O43316 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PAX4O43316 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms