RNA–Protein interactions for RNA: ENST00000564531.1

AC025259.3-201, humanhuman

TSL 3 BASIC

Gene AC025259.3, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.3-201ENST00000564531 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
AC025259.3-201ENST00000564531 CCDC180Q9P1Z9 1646 aa36.1■■■■□ 3.37
AC025259.3-201ENST00000564531 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
AC025259.3-201ENST00000564531 ABCC9O60706 1549 aa34.14■■■■□ 3.06
AC025259.3-201ENST00000564531 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
AC025259.3-201ENST00000564531 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
AC025259.3-201ENST00000564531 DCAF8L2P0C7V8 631 aa33.81■■■■□ 3
AC025259.3-201ENST00000564531 NACADO15069 1562 aa33.68■■■□□ 2.98
AC025259.3-201ENST00000564531 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
AC025259.3-201ENST00000564531 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
AC025259.3-201ENST00000564531 SCRIBQ14160 1630 aa32.94■■■□□ 2.86
AC025259.3-201ENST00000564531 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
AC025259.3-201ENST00000564531 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
AC025259.3-201ENST00000564531 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
AC025259.3-201ENST00000564531 BAZ1AQ9NRL2 1556 aaPredicted RBP31.83■■■□□ 2.69
AC025259.3-201ENST00000564531 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
AC025259.3-201ENST00000564531 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
AC025259.3-201ENST00000564531 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
AC025259.3-201ENST00000564531 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
AC025259.3-201ENST00000564531 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.65
AC025259.3-201ENST00000564531 EIF4G1Q04637 1599 aaKnown RBP31.38■■■□□ 2.61
AC025259.3-201ENST00000564531 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
AC025259.3-201ENST00000564531 WIZO95785 1651 aa31.33■■■□□ 2.61
AC025259.3-201ENST00000564531 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
AC025259.3-201ENST00000564531 ATAD2BQ9ULI0 1458 aa31.19■■■□□ 2.58
AC025259.3-201ENST00000564531 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
AC025259.3-201ENST00000564531 NCAPD3P42695 1498 aa31.04■■■□□ 2.56
AC025259.3-201ENST00000564531 BAZ1BQ9UIG0 1483 aaKnown RBP31.03■■■□□ 2.56
AC025259.3-201ENST00000564531 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
AC025259.3-201ENST00000564531 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.54
AC025259.3-201ENST00000564531 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
AC025259.3-201ENST00000564531 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
AC025259.3-201ENST00000564531 CFTRP13569 1480 aa30.25■■■□□ 2.43
AC025259.3-201ENST00000564531 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
AC025259.3-201ENST00000564531 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
AC025259.3-201ENST00000564531 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
AC025259.3-201ENST00000564531 LAMC3Q9Y6N6 1575 aa30.05■■■□□ 2.4
AC025259.3-201ENST00000564531 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
AC025259.3-201ENST00000564531 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
AC025259.3-201ENST00000564531 ABCC8Q09428 1581 aa29.91■■■□□ 2.38
AC025259.3-201ENST00000564531 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
AC025259.3-201ENST00000564531 NESP48681 1621 aa29.83■■■□□ 2.37
AC025259.3-201ENST00000564531 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
AC025259.3-201ENST00000564531 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
AC025259.3-201ENST00000564531 CEP164Q9UPV0 1460 aa29.72■■■□□ 2.35
AC025259.3-201ENST00000564531 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
AC025259.3-201ENST00000564531 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
AC025259.3-201ENST00000564531 CUX1P39880 1505 aa29.63■■■□□ 2.33
AC025259.3-201ENST00000564531 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
AC025259.3-201ENST00000564531 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
AC025259.3-201ENST00000564531 EEA1Q15075 1411 aa29.5■■■□□ 2.31
AC025259.3-201ENST00000564531 TOPBP1Q92547 1522 aa29.47■■■□□ 2.31
AC025259.3-201ENST00000564531 MRC2Q9UBG0 1479 aa29.44■■■□□ 2.3
AC025259.3-201ENST00000564531 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
AC025259.3-201ENST00000564531 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
AC025259.3-201ENST00000564531 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
AC025259.3-201ENST00000564531 SOGA1O94964 1423 aa29.31■■■□□ 2.28
AC025259.3-201ENST00000564531 WDR62O43379 1518 aa29.29■■■□□ 2.28
AC025259.3-201ENST00000564531 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
AC025259.3-201ENST00000564531 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
AC025259.3-201ENST00000564531 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
AC025259.3-201ENST00000564531 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.26
AC025259.3-201ENST00000564531 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
AC025259.3-201ENST00000564531 CSRNP3Q8WYN3 585 aa29.17■■■□□ 2.26
AC025259.3-201ENST00000564531 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
AC025259.3-201ENST00000564531 CUX2O14529 1486 aa29.14■■■□□ 2.26
AC025259.3-201ENST00000564531 RAD54L2Q9Y4B4 1467 aa29.09■■■□□ 2.25
AC025259.3-201ENST00000564531 WDR97A6NE52 1622 aa29.07■■■□□ 2.24
AC025259.3-201ENST00000564531 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
AC025259.3-201ENST00000564531 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
AC025259.3-201ENST00000564531 KIF21BO75037 1637 aa29.02■■■□□ 2.24
AC025259.3-201ENST00000564531 GOLGA3Q08378 1498 aa28.97■■■□□ 2.23
AC025259.3-201ENST00000564531 LOC105371045A0A1W2PR82 267 aa28.95■■■□□ 2.22
AC025259.3-201ENST00000564531 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
AC025259.3-201ENST00000564531 PRXQ9BXM0 1461 aa28.92■■■□□ 2.22
AC025259.3-201ENST00000564531 ERICH3Q5RHP9 1530 aa28.92■■■□□ 2.22
AC025259.3-201ENST00000564531 IGF1RP08069 1367 aa28.9■■■□□ 2.22
AC025259.3-201ENST00000564531 GAPVD1Q14C86 1478 aa28.89■■■□□ 2.22
AC025259.3-201ENST00000564531 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
AC025259.3-201ENST00000564531 CUL7Q14999 1698 aa28.84■■■□□ 2.21
AC025259.3-201ENST00000564531 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
AC025259.3-201ENST00000564531 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
AC025259.3-201ENST00000564531 RAPGEF2Q9Y4G8 1499 aa28.77■■■□□ 2.2
AC025259.3-201ENST00000564531 GRIN2BQ13224 1484 aa28.76■■■□□ 2.19
AC025259.3-201ENST00000564531 UBTFP17480 764 aaKnown RBP28.73■■■□□ 2.19
AC025259.3-201ENST00000564531 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
AC025259.3-201ENST00000564531 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
AC025259.3-201ENST00000564531 ZNF608Q9ULD9 1512 aaPredicted RBP28.71■■■□□ 2.19
AC025259.3-201ENST00000564531 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.19
AC025259.3-201ENST00000564531 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
AC025259.3-201ENST00000564531 FHAD1B1AJZ9 1412 aa28.63■■■□□ 2.17
AC025259.3-201ENST00000564531 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
AC025259.3-201ENST00000564531 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
AC025259.3-201ENST00000564531 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
AC025259.3-201ENST00000564531 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
AC025259.3-201ENST00000564531 SYNJ2O15056 1496 aa28.44■■■□□ 2.14
AC025259.3-201ENST00000564531 CLIP1P30622 1438 aa28.43■■■□□ 2.14
AC025259.3-201ENST00000564531 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
AC025259.3-201ENST00000564531 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
AC025259.3-201ENST00000564531 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms