RNA–Protein interactions for RNA: ENST00000554743.1

VASH1-204, Transcript of vasohibin 1, humanhuman

TSL 3 BASIC

Gene VASH1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-204ENST00000554743 NISCHQ9Y2I1 1504 aa42.77■■■■■ 4.44
VASH1-204ENST00000554743 CCDC180Q9P1Z9 1646 aa37.8■■■■□ 3.64
VASH1-204ENST00000554743 ABCC9O60706 1549 aa36.12■■■■□ 3.37
VASH1-204ENST00000554743 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
VASH1-204ENST00000554743 DCAF1Q9Y4B6 1507 aa35.5■■■■□ 3.27
VASH1-204ENST00000554743 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
VASH1-204ENST00000554743 NACADO15069 1562 aa35.3■■■■□ 3.24
VASH1-204ENST00000554743 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
VASH1-204ENST00000554743 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
VASH1-204ENST00000554743 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
VASH1-204ENST00000554743 SCRIBQ14160 1630 aa34.46■■■■□ 3.11
VASH1-204ENST00000554743 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
VASH1-204ENST00000554743 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.04
VASH1-204ENST00000554743 PABPN1Q86U42 306 aaKnown RBP eCLIP33.79■■■■□ 3
VASH1-204ENST00000554743 CECR2Q9BXF3 1484 aa33.21■■■□□ 2.91
VASH1-204ENST00000554743 EIF4G1Q04637 1599 aaKnown RBP33.12■■■□□ 2.89
VASH1-204ENST00000554743 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
VASH1-204ENST00000554743 SMARCA4P51532 1647 aa33.08■■■□□ 2.89
VASH1-204ENST00000554743 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
VASH1-204ENST00000554743 RSF1Q96T23 1441 aaPredicted RBP32.83■■■□□ 2.85
VASH1-204ENST00000554743 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
VASH1-204ENST00000554743 CC2D2AQ9P2K1 1620 aa32.78■■■□□ 2.84
VASH1-204ENST00000554743 WIZO95785 1651 aa32.68■■■□□ 2.82
VASH1-204ENST00000554743 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
VASH1-204ENST00000554743 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
VASH1-204ENST00000554743 NCAPD3P42695 1498 aa32.53■■■□□ 2.8
VASH1-204ENST00000554743 HMGXB3Q12766 1538 aa32.51■■■□□ 2.79
VASH1-204ENST00000554743 DNAJC5BQ9UF47 199 aa32.45■■■□□ 2.79
VASH1-204ENST00000554743 BAZ1BQ9UIG0 1483 aaKnown RBP32.41■■■□□ 2.78
VASH1-204ENST00000554743 TOP2AP11388 1531 aaKnown RBP32.39■■■□□ 2.78
VASH1-204ENST00000554743 SUPT5HO00267 1087 aaKnown RBP32.35■■■□□ 2.77
VASH1-204ENST00000554743 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
VASH1-204ENST00000554743 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
VASH1-204ENST00000554743 CFTRP13569 1480 aa31.59■■■□□ 2.65
VASH1-204ENST00000554743 CADPSQ9ULU8 1353 aa31.57■■■□□ 2.64
VASH1-204ENST00000554743 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
VASH1-204ENST00000554743 NESP48681 1621 aa31.5■■■□□ 2.63
VASH1-204ENST00000554743 PDS5BQ9NTI5 1447 aa31.26■■■□□ 2.6
VASH1-204ENST00000554743 KIF21AQ7Z4S6 1674 aa31.24■■■□□ 2.59
VASH1-204ENST00000554743 FANCD2Q9BXW9 1451 aa31.23■■■□□ 2.59
VASH1-204ENST00000554743 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.57
VASH1-204ENST00000554743 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
VASH1-204ENST00000554743 ABCC8Q09428 1581 aa31.01■■■□□ 2.56
VASH1-204ENST00000554743 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
VASH1-204ENST00000554743 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.55
VASH1-204ENST00000554743 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
VASH1-204ENST00000554743 WRNQ14191 1432 aaPredicted RBP eCLIP30.91■■■□□ 2.54
VASH1-204ENST00000554743 CUX1P39880 1505 aa30.9■■■□□ 2.54
VASH1-204ENST00000554743 DNMBPQ6XZF7 1577 aa30.9■■■□□ 2.54
VASH1-204ENST00000554743 BIVM-ERCC5R4GMW8 1640 aa30.89■■■□□ 2.54
VASH1-204ENST00000554743 WDR62O43379 1518 aa30.88■■■□□ 2.53
VASH1-204ENST00000554743 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
VASH1-204ENST00000554743 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
VASH1-204ENST00000554743 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
VASH1-204ENST00000554743 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
VASH1-204ENST00000554743 FGD5Q6ZNL6 1462 aa30.65■■■□□ 2.5
VASH1-204ENST00000554743 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
VASH1-204ENST00000554743 CUX2O14529 1486 aa30.55■■■□□ 2.48
VASH1-204ENST00000554743 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
VASH1-204ENST00000554743 WDR97A6NE52 1622 aa30.51■■■□□ 2.47
VASH1-204ENST00000554743 TARBP1Q13395 1621 aaKnown RBP30.51■■■□□ 2.47
VASH1-204ENST00000554743 IFT140Q96RY7 1462 aa30.45■■■□□ 2.47
VASH1-204ENST00000554743 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
VASH1-204ENST00000554743 SOGA1O94964 1423 aa30.44■■■□□ 2.46
VASH1-204ENST00000554743 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
VASH1-204ENST00000554743 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
VASH1-204ENST00000554743 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
VASH1-204ENST00000554743 EIF4G3O43432 1585 aaKnown RBP30.24■■■□□ 2.43
VASH1-204ENST00000554743 KIF27Q86VH2 1401 aa30.2■■■□□ 2.42
VASH1-204ENST00000554743 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
VASH1-204ENST00000554743 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
VASH1-204ENST00000554743 PBRM1Q86U86 1689 aa30.15■■■□□ 2.42
VASH1-204ENST00000554743 EEA1Q15075 1411 aa30.14■■■□□ 2.42
VASH1-204ENST00000554743 GAPVD1Q14C86 1478 aa30.14■■■□□ 2.42
VASH1-204ENST00000554743 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.41
VASH1-204ENST00000554743 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
VASH1-204ENST00000554743 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
VASH1-204ENST00000554743 CUL7Q14999 1698 aa29.98■■■□□ 2.39
VASH1-204ENST00000554743 IGF1RP08069 1367 aa29.97■■■□□ 2.39
VASH1-204ENST00000554743 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
VASH1-204ENST00000554743 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
VASH1-204ENST00000554743 SNAPC4Q5SXM2 1469 aa29.92■■■□□ 2.38
VASH1-204ENST00000554743 CSRNP3Q8WYN3 585 aa29.88■■■□□ 2.37
VASH1-204ENST00000554743 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
VASH1-204ENST00000554743 FAM9AQ8IZU1 332 aaPredicted RBP29.86■■■□□ 2.37
VASH1-204ENST00000554743 KIF21BO75037 1637 aa29.84■■■□□ 2.37
VASH1-204ENST00000554743 FHAD1B1AJZ9 1412 aa29.83■■■□□ 2.37
VASH1-204ENST00000554743 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
VASH1-204ENST00000554743 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
VASH1-204ENST00000554743 RAPGEF2Q9Y4G8 1499 aa29.74■■■□□ 2.35
VASH1-204ENST00000554743 CHD1O14646 1710 aa29.73■■■□□ 2.35
VASH1-204ENST00000554743 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
VASH1-204ENST00000554743 GOLGA3Q08378 1498 aa29.65■■■□□ 2.34
VASH1-204ENST00000554743 CHMP7Q8WUX9 453 aaPredicted RBP29.56■■■□□ 2.32
VASH1-204ENST00000554743 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
VASH1-204ENST00000554743 NUP160Q12769 1436 aa29.54■■■□□ 2.32
VASH1-204ENST00000554743 CTTNBP2Q8WZ74 1663 aa29.54■■■□□ 2.32
VASH1-204ENST00000554743 FBLN2P98095 1184 aa29.47■■■□□ 2.31
VASH1-204ENST00000554743 CLASP1Q7Z460 1538 aa29.42■■■□□ 2.3
VASH1-204ENST00000554743 KIAA0586Q9BVV6 1533 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms