Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C3Q9Y5Q9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C3Q9Y5Q9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 RPS2P52-201ENST00000469610 820 ntBASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C3Q9Y5Q9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 AC091305.1-201ENST00000479476 895 ntBASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C3Q9Y5Q9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
GTF3C3Q9Y5Q9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 AC027612.3-201ENST00000413684 1047 ntBASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC23.76■■□□□ 1.39
GTF3C3Q9Y5Q9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 TNRC18P2-201ENST00000417666 2714 ntBASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 AC046185.3-201ENST00000623228 1824 ntBASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC23.75■■□□□ 1.39
GTF3C3Q9Y5Q9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC23.74■■□□□ 1.39
GTF3C3Q9Y5Q9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms