RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
RPAIN-203ENST00000381209 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
RPAIN-203ENST00000381209 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
RPAIN-203ENST00000381209 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
RPAIN-203ENST00000381209 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
RPAIN-203ENST00000381209 SHROOM4Q9ULL8 1493 aa31.45■■■□□ 2.63
RPAIN-203ENST00000381209 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
RPAIN-203ENST00000381209 ABCC9O60706 1549 aa31.13■■■□□ 2.57
RPAIN-203ENST00000381209 NACADO15069 1562 aa30.91■■■□□ 2.54
RPAIN-203ENST00000381209 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
RPAIN-203ENST00000381209 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
RPAIN-203ENST00000381209 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
RPAIN-203ENST00000381209 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
RPAIN-203ENST00000381209 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
RPAIN-203ENST00000381209 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
RPAIN-203ENST00000381209 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
RPAIN-203ENST00000381209 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
RPAIN-203ENST00000381209 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
RPAIN-203ENST00000381209 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
RPAIN-203ENST00000381209 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
RPAIN-203ENST00000381209 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
RPAIN-203ENST00000381209 WIZO95785 1651 aa29.31■■■□□ 2.28
RPAIN-203ENST00000381209 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
RPAIN-203ENST00000381209 PEG3Q9GZU2 1588 aa29.02■■■□□ 2.24
RPAIN-203ENST00000381209 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
RPAIN-203ENST00000381209 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
RPAIN-203ENST00000381209 CCDC88BA6NC98 1476 aa28.82■■■□□ 2.2
RPAIN-203ENST00000381209 EIF4G1Q04637 1599 aaKnown RBP28.69■■■□□ 2.18
RPAIN-203ENST00000381209 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
RPAIN-203ENST00000381209 TRIM41Q8WV44 630 aa28.66■■■□□ 2.18
RPAIN-203ENST00000381209 NCAPD3P42695 1498 aa28.58■■■□□ 2.17
RPAIN-203ENST00000381209 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
RPAIN-203ENST00000381209 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
RPAIN-203ENST00000381209 LOC105371045A0A1W2PR82 267 aa28.23■■■□□ 2.11
RPAIN-203ENST00000381209 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.1
RPAIN-203ENST00000381209 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
RPAIN-203ENST00000381209 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
RPAIN-203ENST00000381209 CFTRP13569 1480 aa28.02■■■□□ 2.08
RPAIN-203ENST00000381209 EEA1Q15075 1411 aa27.95■■■□□ 2.06
RPAIN-203ENST00000381209 SYNJ1O43426 1573 aa27.91■■■□□ 2.06
RPAIN-203ENST00000381209 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
RPAIN-203ENST00000381209 SOGA1O94964 1423 aa27.86■■■□□ 2.05
RPAIN-203ENST00000381209 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
RPAIN-203ENST00000381209 CSRNP3Q8WYN3 585 aa27.75■■■□□ 2.03
RPAIN-203ENST00000381209 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
RPAIN-203ENST00000381209 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.03
RPAIN-203ENST00000381209 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
RPAIN-203ENST00000381209 CUX1P39880 1505 aa27.66■■■□□ 2.02
RPAIN-203ENST00000381209 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
RPAIN-203ENST00000381209 TNIKQ9UKE5 1360 aa27.55■■■□□ 2
RPAIN-203ENST00000381209 GOLGA3Q08378 1498 aa27.52■■■□□ 2
RPAIN-203ENST00000381209 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
RPAIN-203ENST00000381209 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
RPAIN-203ENST00000381209 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
RPAIN-203ENST00000381209 KIF21BO75037 1637 aa27.46■■□□□ 1.99
RPAIN-203ENST00000381209 NESP48681 1621 aa27.42■■□□□ 1.98
RPAIN-203ENST00000381209 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
RPAIN-203ENST00000381209 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
RPAIN-203ENST00000381209 DNAJC5BQ9UF47 199 aa27.38■■□□□ 1.97
RPAIN-203ENST00000381209 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
RPAIN-203ENST00000381209 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
RPAIN-203ENST00000381209 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
RPAIN-203ENST00000381209 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
RPAIN-203ENST00000381209 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
RPAIN-203ENST00000381209 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
RPAIN-203ENST00000381209 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
RPAIN-203ENST00000381209 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
RPAIN-203ENST00000381209 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
RPAIN-203ENST00000381209 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
RPAIN-203ENST00000381209 CUX2O14529 1486 aa27.22■■□□□ 1.95
RPAIN-203ENST00000381209 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
RPAIN-203ENST00000381209 URB2Q14146 1524 aaKnown RBP27.14■■□□□ 1.94
RPAIN-203ENST00000381209 IGF1RP08069 1367 aa27.13■■□□□ 1.93
RPAIN-203ENST00000381209 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
RPAIN-203ENST00000381209 CLIP1P30622 1438 aa27.09■■□□□ 1.93
RPAIN-203ENST00000381209 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
RPAIN-203ENST00000381209 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
RPAIN-203ENST00000381209 KIF21AQ7Z4S6 1674 aa26.99■■□□□ 1.91
RPAIN-203ENST00000381209 MRC2Q9UBG0 1479 aa26.92■■□□□ 1.9
RPAIN-203ENST00000381209 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
RPAIN-203ENST00000381209 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
RPAIN-203ENST00000381209 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
RPAIN-203ENST00000381209 HRCP23327 699 aa26.82■■□□□ 1.88
RPAIN-203ENST00000381209 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
RPAIN-203ENST00000381209 CUL7Q14999 1698 aa26.79■■□□□ 1.88
RPAIN-203ENST00000381209 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
RPAIN-203ENST00000381209 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
RPAIN-203ENST00000381209 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
RPAIN-203ENST00000381209 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
RPAIN-203ENST00000381209 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
RPAIN-203ENST00000381209 WDR62O43379 1518 aa26.74■■□□□ 1.87
RPAIN-203ENST00000381209 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
RPAIN-203ENST00000381209 ERCC6Q03468 1493 aa26.67■■□□□ 1.86
RPAIN-203ENST00000381209 APLP2Q06481 763 aa26.67■■□□□ 1.86
RPAIN-203ENST00000381209 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
RPAIN-203ENST00000381209 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
RPAIN-203ENST00000381209 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
RPAIN-203ENST00000381209 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.843e-7■■■□□ 18.2
RPAIN-203ENST00000381209 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
RPAIN-203ENST00000381209 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms