Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 COX20P2-201ENST00000452636 358 ntBASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 ALG1L5P-201ENST00000482043 771 ntBASIC20.66■□□□□ 0.9
EFCC1Q9HA90 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AC005593.1-201ENST00000624894 515 ntBASIC20.66■□□□□ 0.9
EFCC1Q9HA90 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EFCC1Q9HA90 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 AC097374.2-201ENST00000618617 1306 ntBASIC20.65■□□□□ 0.9
EFCC1Q9HA90 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.65■□□□□ 0.9
EFCC1Q9HA90 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 KRT18P2-201ENST00000447938 1258 ntBASIC20.65■□□□□ 0.9
EFCC1Q9HA90 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EFCC1Q9HA90 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EFCC1Q9HA90 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 PGM5P2-202ENST00000637225 1043 ntBASIC20.64■□□□□ 0.89
EFCC1Q9HA90 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCC1Q9HA90 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 AC002310.6-201ENST00000624451 1377 ntBASIC20.63■□□□□ 0.89
EFCC1Q9HA90 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCC1Q9HA90 KRT18P65-201ENST00000439811 1286 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms