RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 NISCHQ9Y2I1 1504 aa40.82■■■■■ 4.13
NECTIN3-206ENST00000485303 CCDC180Q9P1Z9 1646 aa35.15■■■■□ 3.22
NECTIN3-206ENST00000485303 DCAF8L2P0C7V8 631 aa35.11■■■■□ 3.21
NECTIN3-206ENST00000485303 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
NECTIN3-206ENST00000485303 ABCC9O60706 1549 aa34.2■■■■□ 3.07
NECTIN3-206ENST00000485303 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
NECTIN3-206ENST00000485303 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
NECTIN3-206ENST00000485303 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
NECTIN3-206ENST00000485303 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
NECTIN3-206ENST00000485303 NACADO15069 1562 aa32.98■■■□□ 2.87
NECTIN3-206ENST00000485303 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
NECTIN3-206ENST00000485303 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
NECTIN3-206ENST00000485303 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.8
NECTIN3-206ENST00000485303 CECR2Q9BXF3 1484 aa32■■■□□ 2.71
NECTIN3-206ENST00000485303 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.7
NECTIN3-206ENST00000485303 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
NECTIN3-206ENST00000485303 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.66
NECTIN3-206ENST00000485303 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
NECTIN3-206ENST00000485303 BAZ1AQ9NRL2 1556 aaPredicted RBP31.52■■■□□ 2.64
NECTIN3-206ENST00000485303 WIZO95785 1651 aa31.42■■■□□ 2.62
NECTIN3-206ENST00000485303 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
NECTIN3-206ENST00000485303 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
NECTIN3-206ENST00000485303 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
NECTIN3-206ENST00000485303 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
NECTIN3-206ENST00000485303 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.54
NECTIN3-206ENST00000485303 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
NECTIN3-206ENST00000485303 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
NECTIN3-206ENST00000485303 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
NECTIN3-206ENST00000485303 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
NECTIN3-206ENST00000485303 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
NECTIN3-206ENST00000485303 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
NECTIN3-206ENST00000485303 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
NECTIN3-206ENST00000485303 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
NECTIN3-206ENST00000485303 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
NECTIN3-206ENST00000485303 LOC105371045A0A1W2PR82 267 aa30.46■■■□□ 2.47
NECTIN3-206ENST00000485303 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
NECTIN3-206ENST00000485303 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
NECTIN3-206ENST00000485303 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.44
NECTIN3-206ENST00000485303 WRNQ14191 1432 aaPredicted RBP eCLIP30.14■■■□□ 2.41
NECTIN3-206ENST00000485303 CADPSQ9ULU8 1353 aa30.02■■■□□ 2.4
NECTIN3-206ENST00000485303 CFTRP13569 1480 aa29.92■■■□□ 2.38
NECTIN3-206ENST00000485303 NESP48681 1621 aa29.9■■■□□ 2.38
NECTIN3-206ENST00000485303 SOGA1O94964 1423 aa29.87■■■□□ 2.37
NECTIN3-206ENST00000485303 UBTFP17480 764 aaKnown RBP29.84■■■□□ 2.37
NECTIN3-206ENST00000485303 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
NECTIN3-206ENST00000485303 RANGAP1P46060 587 aaPredicted RBP29.78■■■□□ 2.36
NECTIN3-206ENST00000485303 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
NECTIN3-206ENST00000485303 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
NECTIN3-206ENST00000485303 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
NECTIN3-206ENST00000485303 CUX1P39880 1505 aa29.58■■■□□ 2.33
NECTIN3-206ENST00000485303 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
NECTIN3-206ENST00000485303 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
NECTIN3-206ENST00000485303 TOP2BQ02880 1626 aa29.5■■■□□ 2.31
NECTIN3-206ENST00000485303 EEA1Q15075 1411 aa29.48■■■□□ 2.31
NECTIN3-206ENST00000485303 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
NECTIN3-206ENST00000485303 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
NECTIN3-206ENST00000485303 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
NECTIN3-206ENST00000485303 CUX2O14529 1486 aa29.4■■■□□ 2.3
NECTIN3-206ENST00000485303 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
NECTIN3-206ENST00000485303 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
NECTIN3-206ENST00000485303 ERCC6Q03468 1493 aa29.38■■■□□ 2.29
NECTIN3-206ENST00000485303 BIVM-ERCC5R4GMW8 1640 aa29.32■■■□□ 2.28
NECTIN3-206ENST00000485303 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
NECTIN3-206ENST00000485303 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
NECTIN3-206ENST00000485303 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
NECTIN3-206ENST00000485303 GOLGA3Q08378 1498 aa29.28■■■□□ 2.28
NECTIN3-206ENST00000485303 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
NECTIN3-206ENST00000485303 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
NECTIN3-206ENST00000485303 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
NECTIN3-206ENST00000485303 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.27
NECTIN3-206ENST00000485303 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
NECTIN3-206ENST00000485303 RAPGEF2Q9Y4G8 1499 aa29.19■■■□□ 2.26
NECTIN3-206ENST00000485303 KIF21AQ7Z4S6 1674 aa29.17■■■□□ 2.26
NECTIN3-206ENST00000485303 CEP162Q5TB80 1403 aa29.16■■■□□ 2.26
NECTIN3-206ENST00000485303 TNIKQ9UKE5 1360 aa29.15■■■□□ 2.26
NECTIN3-206ENST00000485303 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
NECTIN3-206ENST00000485303 IGF1RP08069 1367 aa29.05■■■□□ 2.24
NECTIN3-206ENST00000485303 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
NECTIN3-206ENST00000485303 APLP2Q06481 763 aa29■■■□□ 2.23
NECTIN3-206ENST00000485303 CLIP1P30622 1438 aa28.99■■■□□ 2.23
NECTIN3-206ENST00000485303 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
NECTIN3-206ENST00000485303 FBLN2P98095 1184 aa28.95■■■□□ 2.22
NECTIN3-206ENST00000485303 ATP1B4Q9UN42 357 aaPredicted RBP28.94■■■□□ 2.22
NECTIN3-206ENST00000485303 KIF21BO75037 1637 aa28.93■■■□□ 2.22
NECTIN3-206ENST00000485303 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
NECTIN3-206ENST00000485303 ABCA10Q8WWZ4 1543 aa28.9■■■□□ 2.22
NECTIN3-206ENST00000485303 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.22
NECTIN3-206ENST00000485303 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
NECTIN3-206ENST00000485303 TRIM26Q12899 539 aaPredicted RBP28.85■■■□□ 2.21
NECTIN3-206ENST00000485303 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
NECTIN3-206ENST00000485303 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
NECTIN3-206ENST00000485303 IFT140Q96RY7 1462 aa28.68■■■□□ 2.18
NECTIN3-206ENST00000485303 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
NECTIN3-206ENST00000485303 WDR62O43379 1518 aa28.65■■■□□ 2.18
NECTIN3-206ENST00000485303 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
NECTIN3-206ENST00000485303 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
NECTIN3-206ENST00000485303 VPS8Q8N3P4 1428 aa28.55■■■□□ 2.16
NECTIN3-206ENST00000485303 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
NECTIN3-206ENST00000485303 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
NECTIN3-206ENST00000485303 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms