RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 NISCHQ9Y2I1 1504 aa42.09■■■■■ 4.33
CROCCP3-203ENST00000589964 CCDC180Q9P1Z9 1646 aa37.53■■■■□ 3.6
CROCCP3-203ENST00000589964 ABCC9O60706 1549 aa37.43■■■■□ 3.58
CROCCP3-203ENST00000589964 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
CROCCP3-203ENST00000589964 NACADO15069 1562 aa35.39■■■■□ 3.26
CROCCP3-203ENST00000589964 DCAF8L2P0C7V8 631 aa35.38■■■■□ 3.25
CROCCP3-203ENST00000589964 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
CROCCP3-203ENST00000589964 DNAJC5BQ9UF47 199 aa34.97■■■■□ 3.19
CROCCP3-203ENST00000589964 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
CROCCP3-203ENST00000589964 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
CROCCP3-203ENST00000589964 UNC13AQ9UPW8 1703 aa34.93■■■■□ 3.18
CROCCP3-203ENST00000589964 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
CROCCP3-203ENST00000589964 DCAF1Q9Y4B6 1507 aa34.67■■■■□ 3.14
CROCCP3-203ENST00000589964 SCRIBQ14160 1630 aa34.41■■■■□ 3.1
CROCCP3-203ENST00000589964 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
CROCCP3-203ENST00000589964 CC2D2AQ9P2K1 1620 aa33.78■■■■□ 3
CROCCP3-203ENST00000589964 EIF4G1Q04637 1599 aaKnown RBP33.76■■■□□ 2.99
CROCCP3-203ENST00000589964 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
CROCCP3-203ENST00000589964 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
CROCCP3-203ENST00000589964 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
CROCCP3-203ENST00000589964 NCAPD3P42695 1498 aa32.73■■■□□ 2.83
CROCCP3-203ENST00000589964 BAZ1AQ9NRL2 1556 aaPredicted RBP32.57■■■□□ 2.8
CROCCP3-203ENST00000589964 MROH2BQ7Z745 1585 aa32.55■■■□□ 2.8
CROCCP3-203ENST00000589964 SMARCA2P51531 1590 aa32.54■■■□□ 2.8
CROCCP3-203ENST00000589964 HMGXB3Q12766 1538 aa32.5■■■□□ 2.79
CROCCP3-203ENST00000589964 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
CROCCP3-203ENST00000589964 BAZ1BQ9UIG0 1483 aaKnown RBP32.38■■■□□ 2.77
CROCCP3-203ENST00000589964 NESP48681 1621 aa32.32■■■□□ 2.76
CROCCP3-203ENST00000589964 WIZO95785 1651 aa32.15■■■□□ 2.74
CROCCP3-203ENST00000589964 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
CROCCP3-203ENST00000589964 CUX2O14529 1486 aa31.95■■■□□ 2.7
CROCCP3-203ENST00000589964 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
CROCCP3-203ENST00000589964 LAMC3Q9Y6N6 1575 aa31.89■■■□□ 2.7
CROCCP3-203ENST00000589964 THOC2Q8NI27 1593 aaKnown RBP31.84■■■□□ 2.69
CROCCP3-203ENST00000589964 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.68
CROCCP3-203ENST00000589964 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
CROCCP3-203ENST00000589964 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
CROCCP3-203ENST00000589964 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
CROCCP3-203ENST00000589964 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
CROCCP3-203ENST00000589964 CFTRP13569 1480 aa31.48■■■□□ 2.63
CROCCP3-203ENST00000589964 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
CROCCP3-203ENST00000589964 FANCD2Q9BXW9 1451 aa31.43■■■□□ 2.62
CROCCP3-203ENST00000589964 WDR62O43379 1518 aa31.4■■■□□ 2.62
CROCCP3-203ENST00000589964 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
CROCCP3-203ENST00000589964 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
CROCCP3-203ENST00000589964 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
CROCCP3-203ENST00000589964 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
CROCCP3-203ENST00000589964 TOPBP1Q92547 1522 aa30.9■■■□□ 2.54
CROCCP3-203ENST00000589964 ZNF608Q9ULD9 1512 aaPredicted RBP30.84■■■□□ 2.53
CROCCP3-203ENST00000589964 DNMBPQ6XZF7 1577 aa30.76■■■□□ 2.52
CROCCP3-203ENST00000589964 SUPT5HO00267 1087 aaKnown RBP30.75■■■□□ 2.51
CROCCP3-203ENST00000589964 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
CROCCP3-203ENST00000589964 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
CROCCP3-203ENST00000589964 POLA1P09884 1462 aaPredicted RBP30.62■■■□□ 2.49
CROCCP3-203ENST00000589964 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
CROCCP3-203ENST00000589964 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
CROCCP3-203ENST00000589964 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
CROCCP3-203ENST00000589964 CUX1P39880 1505 aa30.55■■■□□ 2.48
CROCCP3-203ENST00000589964 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.48
CROCCP3-203ENST00000589964 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
CROCCP3-203ENST00000589964 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
CROCCP3-203ENST00000589964 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
CROCCP3-203ENST00000589964 SOGA1O94964 1423 aa30.41■■■□□ 2.46
CROCCP3-203ENST00000589964 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
CROCCP3-203ENST00000589964 CHD1O14646 1710 aa30.32■■■□□ 2.44
CROCCP3-203ENST00000589964 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
CROCCP3-203ENST00000589964 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
CROCCP3-203ENST00000589964 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
CROCCP3-203ENST00000589964 WDR97A6NE52 1622 aa30.24■■■□□ 2.43
CROCCP3-203ENST00000589964 SNAPC4Q5SXM2 1469 aa30.23■■■□□ 2.43
CROCCP3-203ENST00000589964 FBLN2P98095 1184 aa30.19■■■□□ 2.42
CROCCP3-203ENST00000589964 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
CROCCP3-203ENST00000589964 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
CROCCP3-203ENST00000589964 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
CROCCP3-203ENST00000589964 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
CROCCP3-203ENST00000589964 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
CROCCP3-203ENST00000589964 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
CROCCP3-203ENST00000589964 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
CROCCP3-203ENST00000589964 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
CROCCP3-203ENST00000589964 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
CROCCP3-203ENST00000589964 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
CROCCP3-203ENST00000589964 TOP2BQ02880 1626 aa30.03■■■□□ 2.4
CROCCP3-203ENST00000589964 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
CROCCP3-203ENST00000589964 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
CROCCP3-203ENST00000589964 ARAP1Q96P48 1450 aa29.96■■■□□ 2.39
CROCCP3-203ENST00000589964 CHMP7Q8WUX9 453 aaPredicted RBP29.95■■■□□ 2.39
CROCCP3-203ENST00000589964 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
CROCCP3-203ENST00000589964 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
CROCCP3-203ENST00000589964 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
CROCCP3-203ENST00000589964 CEP170Q5SW79 1584 aa29.72■■■□□ 2.35
CROCCP3-203ENST00000589964 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
CROCCP3-203ENST00000589964 ERICH3Q5RHP9 1530 aa29.66■■■□□ 2.34
CROCCP3-203ENST00000589964 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
CROCCP3-203ENST00000589964 NUP160Q12769 1436 aa29.65■■■□□ 2.34
CROCCP3-203ENST00000589964 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
CROCCP3-203ENST00000589964 IGF1RP08069 1367 aa29.44■■■□□ 2.3
CROCCP3-203ENST00000589964 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
CROCCP3-203ENST00000589964 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
CROCCP3-203ENST00000589964 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
CROCCP3-203ENST00000589964 PRG4Q92954 1404 aaPredicted RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms