RNA–Protein interactions for RNA: ENST00000543303.6

MTHFSD-203, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTHFSD, Length 1,207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-203ENST00000543303 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
MTHFSD-203ENST00000543303 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
MTHFSD-203ENST00000543303 ABCC9O60706 1549 aa36.84■■■■□ 3.49
MTHFSD-203ENST00000543303 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
MTHFSD-203ENST00000543303 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
MTHFSD-203ENST00000543303 NACADO15069 1562 aa35.37■■■■□ 3.25
MTHFSD-203ENST00000543303 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
MTHFSD-203ENST00000543303 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
MTHFSD-203ENST00000543303 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
MTHFSD-203ENST00000543303 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
MTHFSD-203ENST00000543303 PABPN1Q86U42 306 aaKnown RBP eCLIP34.49■■■■□ 3.11
MTHFSD-203ENST00000543303 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
MTHFSD-203ENST00000543303 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
MTHFSD-203ENST00000543303 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
MTHFSD-203ENST00000543303 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
MTHFSD-203ENST00000543303 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
MTHFSD-203ENST00000543303 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
MTHFSD-203ENST00000543303 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
MTHFSD-203ENST00000543303 SMARCA4P51532 1647 aa32.9■■■□□ 2.86
MTHFSD-203ENST00000543303 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
MTHFSD-203ENST00000543303 MROH2BQ7Z745 1585 aa32.76■■■□□ 2.84
MTHFSD-203ENST00000543303 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
MTHFSD-203ENST00000543303 NCAPD3P42695 1498 aa32.69■■■□□ 2.82
MTHFSD-203ENST00000543303 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
MTHFSD-203ENST00000543303 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
MTHFSD-203ENST00000543303 HMGXB3Q12766 1538 aa32.48■■■□□ 2.79
MTHFSD-203ENST00000543303 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
MTHFSD-203ENST00000543303 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
MTHFSD-203ENST00000543303 WIZO95785 1651 aa32.39■■■□□ 2.78
MTHFSD-203ENST00000543303 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
MTHFSD-203ENST00000543303 NESP48681 1621 aa31.93■■■□□ 2.7
MTHFSD-203ENST00000543303 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
MTHFSD-203ENST00000543303 LAMC3Q9Y6N6 1575 aa31.74■■■□□ 2.67
MTHFSD-203ENST00000543303 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
MTHFSD-203ENST00000543303 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
MTHFSD-203ENST00000543303 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
MTHFSD-203ENST00000543303 CFTRP13569 1480 aa31.58■■■□□ 2.65
MTHFSD-203ENST00000543303 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
MTHFSD-203ENST00000543303 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
MTHFSD-203ENST00000543303 FANCD2Q9BXW9 1451 aa31.37■■■□□ 2.61
MTHFSD-203ENST00000543303 THOC2Q8NI27 1593 aaKnown RBP31.37■■■□□ 2.61
MTHFSD-203ENST00000543303 CUX2O14529 1486 aa31.28■■■□□ 2.6
MTHFSD-203ENST00000543303 CEP164Q9UPV0 1460 aa31.28■■■□□ 2.6
MTHFSD-203ENST00000543303 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
MTHFSD-203ENST00000543303 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
MTHFSD-203ENST00000543303 WDR62O43379 1518 aa31.14■■■□□ 2.58
MTHFSD-203ENST00000543303 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
MTHFSD-203ENST00000543303 TOPBP1Q92547 1522 aa30.89■■■□□ 2.54
MTHFSD-203ENST00000543303 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
MTHFSD-203ENST00000543303 ABCC8Q09428 1581 aa30.8■■■□□ 2.52
MTHFSD-203ENST00000543303 CUX1P39880 1505 aa30.72■■■□□ 2.51
MTHFSD-203ENST00000543303 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
MTHFSD-203ENST00000543303 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
MTHFSD-203ENST00000543303 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
MTHFSD-203ENST00000543303 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
MTHFSD-203ENST00000543303 RAD54L2Q9Y4B4 1467 aa30.56■■■□□ 2.48
MTHFSD-203ENST00000543303 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
MTHFSD-203ENST00000543303 SOGA1O94964 1423 aa30.51■■■□□ 2.47
MTHFSD-203ENST00000543303 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
MTHFSD-203ENST00000543303 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
MTHFSD-203ENST00000543303 TOP2BQ02880 1626 aa30.42■■■□□ 2.46
MTHFSD-203ENST00000543303 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.46
MTHFSD-203ENST00000543303 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
MTHFSD-203ENST00000543303 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
MTHFSD-203ENST00000543303 TDRD9Q8NDG6 1382 aaKnown RBP30.37■■■□□ 2.45
MTHFSD-203ENST00000543303 DNAJC5Q9H3Z4 198 aa30.32■■■□□ 2.44
MTHFSD-203ENST00000543303 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
MTHFSD-203ENST00000543303 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
MTHFSD-203ENST00000543303 GAPVD1Q14C86 1478 aa30.14■■■□□ 2.42
MTHFSD-203ENST00000543303 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
MTHFSD-203ENST00000543303 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
MTHFSD-203ENST00000543303 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
MTHFSD-203ENST00000543303 OSCARQ8IYS5 282 aa30.06■■■□□ 2.4
MTHFSD-203ENST00000543303 PBRM1Q86U86 1689 aa30.02■■■□□ 2.4
MTHFSD-203ENST00000543303 MAGI1Q96QZ7 1491 aaPredicted RBP30■■■□□ 2.39
MTHFSD-203ENST00000543303 FBLN2P98095 1184 aa29.98■■■□□ 2.39
MTHFSD-203ENST00000543303 CHD1O14646 1710 aa29.97■■■□□ 2.39
MTHFSD-203ENST00000543303 SYNJ2O15056 1496 aa29.9■■■□□ 2.38
MTHFSD-203ENST00000543303 CHMP7Q8WUX9 453 aaPredicted RBP29.89■■■□□ 2.38
MTHFSD-203ENST00000543303 ERICH3Q5RHP9 1530 aa29.87■■■□□ 2.37
MTHFSD-203ENST00000543303 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
MTHFSD-203ENST00000543303 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
MTHFSD-203ENST00000543303 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
MTHFSD-203ENST00000543303 IGF1RP08069 1367 aa29.8■■■□□ 2.36
MTHFSD-203ENST00000543303 FHAD1B1AJZ9 1412 aa29.79■■■□□ 2.36
MTHFSD-203ENST00000543303 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
MTHFSD-203ENST00000543303 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
MTHFSD-203ENST00000543303 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
MTHFSD-203ENST00000543303 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
MTHFSD-203ENST00000543303 NUP160Q12769 1436 aa29.62■■■□□ 2.33
MTHFSD-203ENST00000543303 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
MTHFSD-203ENST00000543303 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
MTHFSD-203ENST00000543303 CUL7Q14999 1698 aa29.57■■■□□ 2.32
MTHFSD-203ENST00000543303 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
MTHFSD-203ENST00000543303 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
MTHFSD-203ENST00000543303 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
MTHFSD-203ENST00000543303 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
MTHFSD-203ENST00000543303 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
MTHFSD-203ENST00000543303 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
MTHFSD-203ENST00000543303 ERCC6L2Q5T890 1561 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms