Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
CASKIN1Q8WXD9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC38.85■■■■□ 3.81
CASKIN1Q8WXD9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.85■■■■□ 3.81
CASKIN1Q8WXD9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
CASKIN1Q8WXD9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
CASKIN1Q8WXD9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.84■■■■□ 3.81
CASKIN1Q8WXD9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CASKIN1Q8WXD9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.83■■■■□ 3.81
CASKIN1Q8WXD9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC38.82■■■■□ 3.81
CASKIN1Q8WXD9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
CASKIN1Q8WXD9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC38.82■■■■□ 3.81
CASKIN1Q8WXD9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
CASKIN1Q8WXD9 MIR6765-201ENST00000614092 87 ntBASIC38.82■■■■□ 3.81
CASKIN1Q8WXD9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC38.82■■■■□ 3.8
CASKIN1Q8WXD9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
CASKIN1Q8WXD9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC38.81■■■■□ 3.8
CASKIN1Q8WXD9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC38.8■■■■□ 3.8
CASKIN1Q8WXD9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
CASKIN1Q8WXD9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC38.78■■■■□ 3.8
CASKIN1Q8WXD9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.78■■■■□ 3.8
CASKIN1Q8WXD9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC38.77■■■■□ 3.8
CASKIN1Q8WXD9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.77■■■■□ 3.8
CASKIN1Q8WXD9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
CASKIN1Q8WXD9 AL451085.2-201ENST00000605085 799 ntBASIC38.76■■■■□ 3.8
CASKIN1Q8WXD9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC38.76■■■■□ 3.8
CASKIN1Q8WXD9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC38.76■■■■□ 3.8
CASKIN1Q8WXD9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CASKIN1Q8WXD9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.75■■■■□ 3.79
CASKIN1Q8WXD9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CASKIN1Q8WXD9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC38.75■■■■□ 3.79
CASKIN1Q8WXD9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.74■■■■□ 3.79
CASKIN1Q8WXD9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC38.74■■■■□ 3.79
CASKIN1Q8WXD9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC38.74■■■■□ 3.79
CASKIN1Q8WXD9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.73■■■■□ 3.79
CASKIN1Q8WXD9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.73■■■■□ 3.79
CASKIN1Q8WXD9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CASKIN1Q8WXD9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC38.72■■■■□ 3.79
CASKIN1Q8WXD9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
CASKIN1Q8WXD9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC38.71■■■■□ 3.79
CASKIN1Q8WXD9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
CASKIN1Q8WXD9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.71■■■■□ 3.79
CASKIN1Q8WXD9 AC010980.1-201ENST00000587192 1142 ntBASIC38.71■■■■□ 3.79
CASKIN1Q8WXD9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 PVT1_1.1-201ENST00000615125 194 ntBASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC38.7■■■■□ 3.79
CASKIN1Q8WXD9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
CASKIN1Q8WXD9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC38.69■■■■□ 3.78
CASKIN1Q8WXD9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC38.69■■■■□ 3.78
CASKIN1Q8WXD9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CASKIN1Q8WXD9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC38.69■■■■□ 3.78
CASKIN1Q8WXD9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CASKIN1Q8WXD9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC38.68■■■■□ 3.78
CASKIN1Q8WXD9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
CASKIN1Q8WXD9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
CASKIN1Q8WXD9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC38.67■■■■□ 3.78
CASKIN1Q8WXD9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.67■■■■□ 3.78
CASKIN1Q8WXD9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC38.67■■■■□ 3.78
CASKIN1Q8WXD9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.67■■■■□ 3.78
CASKIN1Q8WXD9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 AC074183.2-201ENST00000623112 922 ntBASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 AL449106.1-201ENST00000608517 1980 ntBASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 LINC01003-201ENST00000564834 1764 ntBASIC38.66■■■■□ 3.78
CASKIN1Q8WXD9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC38.65■■■■□ 3.78
CASKIN1Q8WXD9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
CASKIN1Q8WXD9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC38.65■■■■□ 3.78
CASKIN1Q8WXD9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CASKIN1Q8WXD9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CASKIN1Q8WXD9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC38.64■■■■□ 3.78
CASKIN1Q8WXD9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
CASKIN1Q8WXD9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.63■■■■□ 3.78
CASKIN1Q8WXD9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
CASKIN1Q8WXD9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.63■■■■□ 3.78
CASKIN1Q8WXD9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
CASKIN1Q8WXD9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC38.63■■■■□ 3.77
CASKIN1Q8WXD9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.63■■■■□ 3.77
CASKIN1Q8WXD9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
CASKIN1Q8WXD9 AL035685.1-201ENST00000636663 812 ntBASIC38.63■■■■□ 3.77
CASKIN1Q8WXD9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
CASKIN1Q8WXD9 AC103834.1-201ENST00000520383 144 ntBASIC38.62■■■■□ 3.77
CASKIN1Q8WXD9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC38.61■■■■□ 3.77
CASKIN1Q8WXD9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC38.61■■■■□ 3.77
CASKIN1Q8WXD9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC38.61■■■■□ 3.77
CASKIN1Q8WXD9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
CASKIN1Q8WXD9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
CASKIN1Q8WXD9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC38.59■■■■□ 3.77
CASKIN1Q8WXD9 AC139426.1-201ENST00000568218 2529 ntBASIC38.59■■■■□ 3.77
CASKIN1Q8WXD9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.59■■■■□ 3.77
CASKIN1Q8WXD9 AC018755.3-202ENST00000596210 929 ntBASIC38.59■■■■□ 3.77
CASKIN1Q8WXD9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
CASKIN1Q8WXD9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC38.58■■■■□ 3.77
CASKIN1Q8WXD9 AC139795.1-202ENST00000500444 432 ntBASIC38.58■■■■□ 3.77
CASKIN1Q8WXD9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.58■■■■□ 3.77
CASKIN1Q8WXD9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms