Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
CFAP43Q8NDM7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
CFAP43Q8NDM7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
CFAP43Q8NDM7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
CFAP43Q8NDM7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
CFAP43Q8NDM7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC39.11■■■■□ 3.85
CFAP43Q8NDM7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC39.1■■■■□ 3.85
CFAP43Q8NDM7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
CFAP43Q8NDM7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC39.09■■■■□ 3.85
CFAP43Q8NDM7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC39.09■■■■□ 3.85
CFAP43Q8NDM7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
CFAP43Q8NDM7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
CFAP43Q8NDM7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC39.08■■■■□ 3.85
CFAP43Q8NDM7 AC139795.1-202ENST00000500444 432 ntBASIC39.08■■■■□ 3.85
CFAP43Q8NDM7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC39.08■■■■□ 3.85
CFAP43Q8NDM7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC39.07■■■■□ 3.85
CFAP43Q8NDM7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.07■■■■□ 3.85
CFAP43Q8NDM7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC39.07■■■■□ 3.84
CFAP43Q8NDM7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
CFAP43Q8NDM7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC39.06■■■■□ 3.84
CFAP43Q8NDM7 MIR6765-201ENST00000614092 87 ntBASIC39.06■■■■□ 3.84
CFAP43Q8NDM7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC39.06■■■■□ 3.84
CFAP43Q8NDM7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CFAP43Q8NDM7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC39.05■■■■□ 3.84
CFAP43Q8NDM7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC39.05■■■■□ 3.84
CFAP43Q8NDM7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC39.04■■■■□ 3.84
CFAP43Q8NDM7 YBX1P4-201ENST00000392794 808 ntBASIC39.04■■■■□ 3.84
CFAP43Q8NDM7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
CFAP43Q8NDM7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CFAP43Q8NDM7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CFAP43Q8NDM7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 AC103724.3-201ENST00000564481 992 ntBASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 BHLHE23-202ENST00000612929 1109 ntBASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 AL356441.2-201ENST00000443009 864 ntBASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC39.03■■■■□ 3.84
CFAP43Q8NDM7 DRD5P2-201ENST00000421395 2012 ntBASIC39.02■■■■□ 3.84
CFAP43Q8NDM7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC39.01■■■■□ 3.84
CFAP43Q8NDM7 MIR935-201ENST00000401179 91 ntBASIC39■■■■□ 3.83
CFAP43Q8NDM7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC39■■■■□ 3.83
CFAP43Q8NDM7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC39■■■■□ 3.83
CFAP43Q8NDM7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
CFAP43Q8NDM7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.99■■■■□ 3.83
CFAP43Q8NDM7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.99■■■■□ 3.83
CFAP43Q8NDM7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CFAP43Q8NDM7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
CFAP43Q8NDM7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CFAP43Q8NDM7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC38.98■■■■□ 3.83
CFAP43Q8NDM7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC38.97■■■■□ 3.83
CFAP43Q8NDM7 HYI-210ENST00000486909 905 ntTSL 5 BASIC38.97■■■■□ 3.83
CFAP43Q8NDM7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC38.97■■■■□ 3.83
CFAP43Q8NDM7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC38.97■■■■□ 3.83
CFAP43Q8NDM7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
CFAP43Q8NDM7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.96■■■■□ 3.83
CFAP43Q8NDM7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
CFAP43Q8NDM7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC38.96■■■■□ 3.83
CFAP43Q8NDM7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC38.96■■■■□ 3.83
CFAP43Q8NDM7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC38.95■■■■□ 3.83
CFAP43Q8NDM7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CFAP43Q8NDM7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
CFAP43Q8NDM7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.95■■■■□ 3.83
CFAP43Q8NDM7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC38.95■■■■□ 3.83
CFAP43Q8NDM7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC38.94■■■■□ 3.82
CFAP43Q8NDM7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.94■■■■□ 3.82
CFAP43Q8NDM7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC38.94■■■■□ 3.82
CFAP43Q8NDM7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
CFAP43Q8NDM7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
CFAP43Q8NDM7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.93■■■■□ 3.82
CFAP43Q8NDM7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.93■■■■□ 3.82
CFAP43Q8NDM7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC38.93■■■■□ 3.82
CFAP43Q8NDM7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.92■■■■□ 3.82
CFAP43Q8NDM7 AL359258.2-201ENST00000564063 1566 ntBASIC38.91■■■■□ 3.82
CFAP43Q8NDM7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.91■■■■□ 3.82
CFAP43Q8NDM7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC38.91■■■■□ 3.82
CFAP43Q8NDM7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.9■■■■□ 3.82
CFAP43Q8NDM7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC38.9■■■■□ 3.82
CFAP43Q8NDM7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CFAP43Q8NDM7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC38.88■■■■□ 3.81
CFAP43Q8NDM7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.87■■■■□ 3.81
CFAP43Q8NDM7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC38.87■■■■□ 3.81
CFAP43Q8NDM7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC38.87■■■■□ 3.81
CFAP43Q8NDM7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms