Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RGPD4Q7Z3J3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 LONRF2P2-201ENST00000439212 571 ntBASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.14■■■□□ 2.74
RGPD4Q7Z3J3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
RGPD4Q7Z3J3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RGPD4Q7Z3J3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RGPD4Q7Z3J3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RGPD4Q7Z3J3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.12■■■□□ 2.73
RGPD4Q7Z3J3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RGPD4Q7Z3J3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
RGPD4Q7Z3J3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
RGPD4Q7Z3J3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RGPD4Q7Z3J3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.11■■■□□ 2.73
RGPD4Q7Z3J3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RGPD4Q7Z3J3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.1■■■□□ 2.73
RGPD4Q7Z3J3 AL139246.5-201ENST00000606645 996 ntBASIC32.1■■■□□ 2.73
RGPD4Q7Z3J3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RGPD4Q7Z3J3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 BX664725.1-201ENST00000438252 379 ntBASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.09■■■□□ 2.73
RGPD4Q7Z3J3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RGPD4Q7Z3J3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RGPD4Q7Z3J3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.07■■■□□ 2.72
RGPD4Q7Z3J3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.07■■■□□ 2.72
RGPD4Q7Z3J3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC32.07■■■□□ 2.72
RGPD4Q7Z3J3 AC087393.1-201ENST00000582896 145 ntBASIC32.07■■■□□ 2.72
RGPD4Q7Z3J3 MIR4787-201ENST00000607364 84 ntBASIC32.07■■■□□ 2.72
RGPD4Q7Z3J3 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.06■■■□□ 2.72
RGPD4Q7Z3J3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.05■■■□□ 2.72
RGPD4Q7Z3J3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
RGPD4Q7Z3J3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RGPD4Q7Z3J3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 KRT125P-201ENST00000546827 989 ntBASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RGPD4Q7Z3J3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RGPD4Q7Z3J3 AP004833.2-201ENST00000532228 1454 ntBASIC32.02■■■□□ 2.72
RGPD4Q7Z3J3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC32.01■■■□□ 2.71
RGPD4Q7Z3J3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.01■■■□□ 2.71
RGPD4Q7Z3J3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RGPD4Q7Z3J3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
RGPD4Q7Z3J3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RGPD4Q7Z3J3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.96■■■□□ 2.71
RGPD4Q7Z3J3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.96■■■□□ 2.71
RGPD4Q7Z3J3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.71
RGPD4Q7Z3J3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RGPD4Q7Z3J3 AC110285.6-201ENST00000617652 491 ntBASIC31.95■■■□□ 2.71
RGPD4Q7Z3J3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RGPD4Q7Z3J3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
RGPD4Q7Z3J3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RGPD4Q7Z3J3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.94■■■□□ 2.7
RGPD4Q7Z3J3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.94■■■□□ 2.7
RGPD4Q7Z3J3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RGPD4Q7Z3J3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.92■■■□□ 2.7
RGPD4Q7Z3J3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.92■■■□□ 2.7
RGPD4Q7Z3J3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
RGPD4Q7Z3J3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
RGPD4Q7Z3J3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
RGPD4Q7Z3J3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD4Q7Z3J3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RGPD4Q7Z3J3 AC100797.4-201ENST00000631653 1827 ntBASIC31.9■■■□□ 2.7
RGPD4Q7Z3J3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.9■■■□□ 2.7
RGPD4Q7Z3J3 RARRES2P6-201ENST00000567333 442 ntBASIC31.9■■■□□ 2.7
RGPD4Q7Z3J3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RGPD4Q7Z3J3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.89■■■□□ 2.7
RGPD4Q7Z3J3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.89■■■□□ 2.7
RGPD4Q7Z3J3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.89■■■□□ 2.69
RGPD4Q7Z3J3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RGPD4Q7Z3J3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms